6URG | pdb_00006urg

Cryo-EM structure of human CPSF160-WDR33-CPSF30-CPSF100 PIM complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BSBP_bac_1e6urgB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: SBP_bac_1ECOD (v294.1)
CSBP_bac_1e6urgC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: SBP_bac_1ECOD (v294.1)
ASBP_bac_1e6urgA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: SBP_bac_1ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF15663Zinc-finger containing family (zf-CCCH_3)Zinc-finger containing family- Family
PF10433RSE1/DDB1/CPSF1 first beta-propeller (Beta-prop_RSE1_1st)RSE1/DDB1/CPSF1 first beta-propeller- Repeat
PF23726RSE1/DDB1/CPSF1 second beta-propeller (Beta-prop_RSE1_2nd)RSE1/DDB1/CPSF1 second beta-propeller- Repeat
PF03178CPSF A subunit region (CPSF_A)CPSF A subunit region- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
pre-mRNA 3' end processing protein WDR33
D [auth F]Cleavage and polyadenylation specificity factor subunit 2
Cleavage and polyadenylation specificity factor subunit 4
Cleavage and polyadenylation specificity factor subunit 1

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosQ9C0J8
D [auth F]PharosQ9P2I0
PharosO95639
PharosQ10570