6TSU | pdb_00006tsu

Capsid of empty GTA particle computed with C5 symmetry

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z [auth F4]	Ldh_1_C	e6tsuF41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
Y [auth E4]	Ldh_1_C	e6tsuE41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
X [auth D4]	Ldh_1_C	e6tsuD41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
W [auth A4]	Oxidored_q2	e6tsuA41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Oxidored_q2	ECOD (develop294)
V [auth I4]	Oxidored_q2	e6tsuI41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Oxidored_q2	ECOD (develop294)
U [auth H4]	Ldh_1_C	e6tsuH41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
T [auth L4]	Ldh_1_C	e6tsuL41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
S [auth V4]	Ldh_1_C	e6tsuV41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
R [auth J4]	Ldh_1_C	e6tsuJ41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
Q [auth K4]	Ldh_1_C	e6tsuK41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
P [auth S4]	Oxidored_q2	e6tsuS41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Oxidored_q2	ECOD (develop294)
O [auth T4]	Ldh_1_C	e6tsuT41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
N [auth U4]	Ldh_1_C	e6tsuU41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
M [auth W4]	Oxidored_q2	e6tsuW41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Oxidored_q2	ECOD (develop294)
L [auth P4]	Ldh_1_C	e6tsuP41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
K [auth O4]	Ldh_1_C	e6tsuO41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
J [auth Q4]	Oxidored_q2	e6tsuQ41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Oxidored_q2	ECOD (develop294)
I [auth M4]	Ldh_1_C	e6tsuM41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
H [auth R4]	Ldh_1_C	e6tsuR41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
G [auth N4]	Ldh_1_C	e6tsuN41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
F [auth B5]	Ldh_1_C	e6tsuB51	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
E [auth A5]	Oxidored_q2	e6tsuA51	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Oxidored_q2	ECOD (develop294)
D [auth Z4]	Ldh_1_C	e6tsuZ41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
CA [auth C4]	Oxidored_q2	e6tsuC41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Oxidored_q2	ECOD (develop294)
C [auth Y4]	Ldh_1_C	e6tsuY41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
BA [auth B4]	Ldh_1_C	e6tsuB41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
B [auth X4]	Ldh_1_C	e6tsuX41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
AA [auth G4]	Ldh_1_C	e6tsuG41	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)
A [auth C5]	Ldh_1_C	e6tsuC51	A: alpha bundles	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], CA [auth C4], D [auth Z4], E [auth A5], F [auth B5], G [auth N4], H [auth R4], I [auth M4], J [auth Q4], K [auth O4], L [auth P4], M [auth W4], N [auth U4], O [auth T4], P [auth S4], Q [auth K4], R [auth J4], S [auth V4], T [auth L4], U [auth H4], V [auth I4], W [auth A4], X [auth D4], Y [auth E4], Z [auth F4]	PF05065	Phage capsid family (Phage_capsid)	Phage capsid family	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], CA [auth C4], D [auth Z4], E [auth A5], F [auth B5], G [auth N4], H [auth R4], I [auth M4], J [auth Q4], K [auth O4], L [auth P4], M [auth W4], N [auth U4], O [auth T4], P [auth S4], Q [auth K4], R [auth J4], S [auth V4], T [auth L4], U [auth H4], V [auth I4], W [auth A4], X [auth D4], Y [auth E4], Z [auth F4]	IPR054612	Phage capsid-like, C-terminal	Domain
A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], A [auth C5], AA [auth G4], B [auth X4], BA [auth B4], C [auth Y4], CA [auth C4], D [auth Z4], E [auth A5], F [auth B5], G [auth N4], H [auth R4], I [auth M4], J [auth Q4], K [auth O4], L [auth P4], M [auth W4], N [auth U4], O [auth T4], P [auth S4], Q [auth K4], R [auth J4], S [auth V4], T [auth L4], U [auth H4], V [auth I4], W [auth A4], X [auth D4], Y [auth E4], Z [auth F4]	IPR024455	Phage capsid	Family