6TPL | pdb_00006tpl

D0-D1 domain of Intimin

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d6tplb1	All beta proteins	Immunoglobulin-like beta-sandwich	Invasin/intimin cell-adhesion fragments	Invasin/intimin cell-adhesion fragments	Intimin	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d6tpla1	All beta proteins	Immunoglobulin-like beta-sandwich	Invasin/intimin cell-adhesion fragments	Invasin/intimin cell-adhesion fragments	Intimin	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Invasin/intimin cell-adhesion fragments	8055355	3002046	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Invasin/intimin cell-adhesion fragments	8055355	3002046	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Invasin_D3	e6tplB2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Invasin_D3	ECOD (1.6)
A	Invasin_D3	e6tplA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Invasin_D3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (utative)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02369	Bacterial Ig-like domain (group 1) (Big_1)	Bacterial Ig-like domain (group 1)	This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial surface proteins such as intimins and invasins involved in pathogenicity.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Intimin	-	cell adhesion cellular process	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR038177	Inverse autotransporter, beta-domain superfamily	Homologous Superfamily
A, B	IPR003535	Intimin/invasin bacterial adhesion mediator protein	Family
A, B	IPR003344	Big-1 (bacterial Ig-like domain 1) domain	Domain
A, B	IPR016187	C-type lectin fold	Homologous Superfamily
A, B	IPR013117	Intimin, C-terminal	Domain
A, B	IPR003343	Bacterial Ig-like domain, group 2	Domain
A, B	IPR051715	Intimin/Invasin domain-containing protein	Family
A, B	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B	IPR016186	C-type lectin-like/link domain superfamily	Homologous Superfamily
A, B	IPR024519	Inverse autotransporter, beta-domain	Domain
A, B	IPR018392	LysM domain	Domain
A, B	IPR008964	Invasin/intimin cell-adhesion fragments	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.