6TFL | pdb_00006tfl

Lsm protein (SmAP) from Halobacterium salinarum


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
GSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
HSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
JSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
LSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
MSCOP2 FamilySm motif of small nuclear ribonucleoproteins, SNRNP 8102055 4001809 SCOP2 (2022-06-29)
MSCOP2 SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2 (2022-06-29)
NSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
KSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySm-like ribonucleoproteins 8102056 3000419 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALSMe6tflA1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
CLSMe6tflC1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
DLSMe6tflD1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
GLSMe6tflG1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
HLSMe6tflH1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
ILSMe6tflI1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
JLSMe6tflJ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
LLSMe6tflL1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
MLSMe6tflM1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
NLSMe6tflN1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
KLSMe6tflK1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
FLSMe6tflF1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
ELSMe6tflE1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
BLSMe6tflB1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
RNA-binding protein Lsm - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR001163Sm domain, eukaryotic/archaea-typeDomain
A, B, C, D, E
IPR010920LSM domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR047575Sm domainDomain