6TC3 | pdb_00006tc3

Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth S081]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
N [auth S141]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
U [auth S211]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
PA [auth L241]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
RA [auth L271]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
TA [auth L291]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
I [auth S091]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
G [auth S071]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
F [auth S061]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
ZA [auth L361]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
YA [auth L351]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
WA [auth L331]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
VA [auth L321]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
UA [auth L301]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
SA [auth L281]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
QA [auth L251]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
OA [auth L231]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
NA [auth L221]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
D [auth S041]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
MA [auth L211]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
LA [auth L201]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
KA [auth L191]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
JA [auth L181]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
IA [auth L171]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
HA [auth L161]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
GA [auth L151]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
FA [auth L141]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
EA [auth L131]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
DA [auth L311]SCOP2B SuperfamilyL28p-like 8032740 3001966 SCOP2B (2022-06-29)
CA [auth L091]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
CA [auth L091]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
BA [auth L061]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
BA [auth L061]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
AA [auth L051]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
Z [auth L041]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
Y [auth L031]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
X [auth L021]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
X [auth L021]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
B [auth S021]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
S [auth S191]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
Q [auth S171]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
P [auth S161]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
O [auth S151]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
M [auth S131]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
L [auth S121]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
K [auth S111]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
J [auth S101]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth S081]e6tc3S0811 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
N [auth S141]e6tc3S1411 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
U [auth S211]e6tc3S2111 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
PA [auth L241]e6tc3L2411 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
RA [auth L271]e6tc3L2711 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
TA [auth L291]e6tc3L2911 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
XA [auth L341]e6tc3L3411 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
I [auth S091]e6tc3S0911 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
G [auth S071]e6tc3S0711 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
F [auth S061]e6tc3S0611 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
ZA [auth L361]e6tc3L3611 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
YA [auth L351]e6tc3L3511 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
E [auth S051]e6tc3S0511 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
WA [auth L331]e6tc3L3311 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
VA [auth L321]e6tc3L3211 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
UA [auth L301]e6tc3L3011 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
SA [auth L281]e6tc3L2811 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
QA [auth L251]e6tc3L2511 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
OA [auth L231]e6tc3L2311 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
NA [auth L221]e6tc3L2211 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
D [auth S041]e6tc3S0411 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
MA [auth L211]e6tc3L2111 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
LA [auth L201]e6tc3L2011 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
KA [auth L191]e6tc3L1911 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
JA [auth L181]e6tc3L1811 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
IA [auth L171]e6tc3L1711 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
HA [auth L161]e6tc3L1611 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
GA [auth L151]e6tc3L1511 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
FA [auth L141]e6tc3L1411 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
EA [auth L131]e6tc3L1311 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
DA [auth L311]e6tc3L3111 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
C [auth S031]e6tc3S0311 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
CA [auth L091]e6tc3L0911 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
BA [auth L061]e6tc3L0611 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
AA [auth L051]e6tc3L0511 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
Z [auth L041]e6tc3L0411 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Class I glutamine amidotransferase-likeT: Ephrin_lbdF:ECOD (20:10:01)
Y [auth L031]e6tc3L0311 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
X [auth L021]e6tc3L0211 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
T [auth S201]e6tc3S2011 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
B [auth S021]e6tc3S0211 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
S [auth S191]e6tc3S1911 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
R [auth S181]e6tc3S1811 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
Q [auth S171]e6tc3S1711 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
P [auth S161]e6tc3S1611 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
O [auth S151]e6tc3S1511 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
M [auth S131]e6tc3S1311 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
L [auth S121]e6tc3S1211 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
K [auth S111]e6tc3S1111 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)
J [auth S101]e6tc3S1011 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Hist_deacetylF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth S081]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
N [auth S141]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
U [auth S211]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
PA [auth L241]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
PA [auth L241]PF00467KOW motif (KOW)KOW motif- Family
TA [auth L291]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
XA [auth L341]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
I [auth S091]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
G [auth S071]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
F [auth S061]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
ZA [auth L361]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
YA [auth L351]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
E [auth S051]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
E [auth S051]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
WA [auth L331]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
VA [auth L321]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
UA [auth L301]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
SA [auth L281]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
QA [auth L251]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
OA [auth L231]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
NA [auth L221]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
D [auth S041]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth S041]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MA [auth L211]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
LA [auth L201]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
KA [auth L191]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
JA [auth L181]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
IA [auth L171]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
HA [auth L161]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
GA [auth L151]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
FA [auth L141]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
EA [auth L131]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
DA [auth L311]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
C [auth S031]PF07650KH domain (KH_2)KH domainDomain
C [auth S031]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
CA [auth L091]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
CA [auth L091]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
BA [auth L061]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
AA [auth L051]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
AA [auth L051]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
Z [auth L041]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
Y [auth L031]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
X [auth L021]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
X [auth L021]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
T [auth S201]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
B [auth S021]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
S [auth S191]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
Q [auth S171]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
P [auth S161]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
O [auth S151]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
M [auth S131]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
L [auth S121]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
K [auth S111]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
J [auth S101]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
H [auth S081]30S ribosomal protein S8
N [auth S141]30S ribosomal protein S14
U [auth S211]30S ribosomal protein S21
PA [auth L241]50S ribosomal protein L24
RA [auth L271]50S ribosomal protein L27
TA [auth L291]50S ribosomal protein L29
XA [auth L341]50S ribosomal protein L34
I [auth S091]30S ribosomal protein S9
G [auth S071]30S ribosomal protein S7
F [auth S061]30S ribosomal protein S6
CB [auth PTR1]P-site Arg-tRNA---
BB [auth MRN1]mRNA---
AB [auth SPE1]SpeFL -
ZA [auth L361]50S ribosomal protein L36
YA [auth L351]50S ribosomal protein L35
E [auth S051]30S ribosomal protein S5
WA [auth L331]50S ribosomal protein L33
VA [auth L321]50S ribosomal protein L32
UA [auth L301]50S ribosomal protein L30
SA [auth L281]50S ribosomal protein L28
QA [auth L251]50S ribosomal protein L25
OA [auth L231]50S ribosomal protein L23
NA [auth L221]50S ribosomal protein L22
D [auth S041]30S ribosomal protein S4
MA [auth L211]50S ribosomal protein L21
LA [auth L201]50S ribosomal protein L20
KA [auth L191]50S ribosomal protein L19
JA [auth L181]50S ribosomal protein L18
IA [auth L171]50S ribosomal protein L17
HA [auth L161]50S ribosomal protein L16
GA [auth L151]50S ribosomal protein L15
FA [auth L141]50S ribosomal protein L14
EA [auth L131]50S ribosomal protein L13
DA [auth L311]50S ribosomal protein L31
C [auth S031]30S ribosomal protein S3
CA [auth L091]50S ribosomal protein L9
BA [auth L061]50S ribosomal protein L6
AA [auth L051]50S ribosomal protein L5
Z [auth L041]50S ribosomal protein L4
Y [auth L031]50S ribosomal protein L3
X [auth L021]50S ribosomal protein L2
W [auth 05S1]5S rRNA---
V [auth 23S1]23S rRNA---
T [auth S201]30S ribosomal protein S20
B [auth S021]30S ribosomal protein S2
S [auth S191]30S ribosomal protein S19
R [auth S181]30S ribosomal protein S18
Q [auth S171]30S ribosomal protein S17
P [auth S161]30S ribosomal protein S16
O [auth S151]30S ribosomal protein S15
M [auth S131]30S ribosomal protein S13
L [auth S121]30S ribosomal protein S12
K [auth S111]30S ribosomal protein S11
J [auth S101]30S ribosomal protein S10
A [auth 16S1]16S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
H [auth S081]IPR000630Small ribosomal subunit protein uS8Family
H [auth S081]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth S081]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
N [auth S141]IPR001209Small ribosomal subunit protein uS14Family
N [auth S141]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth S141]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
U [auth S211]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
U [auth S211]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
U [auth S211]IPR001911Small ribosomal subunit protein bS21Family
PA [auth L241]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
PA [auth L241]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
PA [auth L241]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
PA [auth L241]IPR003256Large ribosomal subunit protein uL24Family
PA [auth L241]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
PA [auth L241]IPR005824KOWDomain
PA [auth L241]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
RA [auth L271]IPR001684Large ribosomal subunit protein bL27Family
RA [auth L271]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
TA [auth L291]IPR050063Universal ribosomal protein uL29Family
TA [auth L291]IPR001854Large ribosomal subunit protein uL29Family
TA [auth L291]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
TA [auth L291]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
XA [auth L341]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
XA [auth L341]IPR000271Large ribosomal subunit protein bL34Family
I [auth S091]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth S091]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
I [auth S091]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth S091]IPR000754Small ribosomal subunit protein uS9Family
I [auth S091]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
G [auth S071]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth S071]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
G [auth S071]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth S071]IPR000235Small ribosomal subunit protein uS7Family
G [auth S071]IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth S061]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth S061]IPR000529Small ribosomal subunit protein bS6Family
F [auth S061]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth S061]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth S061]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
AB [auth SPE1]IPR021237Leader peptide SpeFLFamily
ZA [auth L361]IPR000473Large ribosomal subunit protein bL36Family
ZA [auth L361]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
YA [auth L351]IPR021137Large ribosomal subunit protein bL35-likeFamily
YA [auth L351]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
YA [auth L351]IPR001706Large ribosomal subunit protein bL35Family
YA [auth L351]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
E [auth S051]IPR000851Small ribosomal subunit protein uS5Family
E [auth S051]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth S051]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
E [auth S051]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth S051]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth S051]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth S051]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
WA [auth L331]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WA [auth L331]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
WA [auth L331]IPR001705Large ribosomal subunit protein bL33Family
WA [auth L331]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
VA [auth L321]IPR002677Large ribosomal subunit protein bL32Family
VA [auth L321]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VA [auth L321]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
UA [auth L301]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
UA [auth L301]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
UA [auth L301]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
UA [auth L301]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
SA [auth L281]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
SA [auth L281]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
SA [auth L281]IPR026569Large ribosomal subunit protein bL28Family
SA [auth L281]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
QA [auth L251]IPR020055Ribosomal protein bL25, short-formFamily
QA [auth L251]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
QA [auth L251]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
QA [auth L251]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
QA [auth L251]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
OA [auth L231]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
OA [auth L231]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
OA [auth L231]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
OA [auth L231]IPR013025Large ribosomal subunit protein uL23-likeFamily
NA [auth L221]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
NA [auth L221]IPR001063Large ribosomal subunit protein uL22Family
NA [auth L221]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
NA [auth L221]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
NA [auth L221]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
D [auth S041]IPR002942RNA-binding S4 domainDomain
D [auth S041]IPR022801Small ribosomal subunit protein uS4Family
D [auth S041]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth S041]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth S041]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth S041]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
MA [auth L211]IPR028909Large ribosomal subunit protein bL21-likeFamily
MA [auth L211]IPR001787Large ribosomal subunit protein bL21Family
MA [auth L211]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
MA [auth L211]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
LA [auth L201]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
LA [auth L201]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
LA [auth L201]IPR005813Large ribosomal subunit protein bL20Family
KA [auth L191]IPR001857Large ribosomal subunit protein bL19Family
KA [auth L191]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
KA [auth L191]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
KA [auth L191]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JA [auth L181]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
JA [auth L181]IPR057268Large ribosomal subunit protein uL18Family
JA [auth L181]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
IA [auth L171]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
IA [auth L171]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
IA [auth L171]IPR000456Large ribosomal subunit protein bL17Family
HA [auth L161]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
HA [auth L161]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
HA [auth L161]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
HA [auth L161]IPR016180Large ribosomal subunit protein uL16 domainDomain
HA [auth L161]IPR047873Large ribosomal subunit protein uL16Family
GA [auth L151]IPR021131Large ribosomal subunit protein uL15/eL18Domain
GA [auth L151]IPR030878Large ribosomal subunit protein uL15Family
GA [auth L151]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
GA [auth L151]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
GA [auth L151]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
FA [auth L141]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
FA [auth L141]IPR000218Large ribosomal subunit protein uL14Family
FA [auth L141]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
FA [auth L141]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
EA [auth L131]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
EA [auth L131]IPR005822Large ribosomal subunit protein uL13Family
EA [auth L131]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
EA [auth L131]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
DA [auth L311]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
DA [auth L311]IPR027491Large ribosomal subunit protein bL31 type AFamily
DA [auth L311]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
DA [auth L311]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
C [auth S031]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
C [auth S031]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth S031]IPR057258Small ribosomal subunit protein uS3Family
C [auth S031]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth S031]IPR004087K Homology domainDomain
C [auth S031]IPR004044K Homology domain, type 2Domain
C [auth S031]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth S031]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth S031]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
CA [auth L091]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
CA [auth L091]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
CA [auth L091]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
CA [auth L091]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
CA [auth L091]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
CA [auth L091]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
CA [auth L091]IPR000244Large ribosomal subunit protein bL9Family
BA [auth L061]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
BA [auth L061]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
BA [auth L061]IPR000702Large ribosomal subunit protein uL6-likeFamily
BA [auth L061]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
BA [auth L061]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
AA [auth L051]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
AA [auth L051]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
AA [auth L051]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
AA [auth L051]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
AA [auth L051]IPR002132Large ribosomal subunit protein uL5Family
AA [auth L051]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
Z [auth L041]IPR013005Large ribosomal subunit protein uL4-likeFamily
Z [auth L041]IPR002136Large ribosomal subunit protein uL4Family
Z [auth L041]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
Y [auth L031]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
Y [auth L031]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
Y [auth L031]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
Y [auth L031]IPR000597Large ribosomal subunit protein uL3Family
X [auth L021]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
X [auth L021]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
X [auth L021]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth L021]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth L021]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
X [auth L021]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
X [auth L021]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
X [auth L021]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
X [auth L021]IPR002171Large ribosomal subunit protein uL2Family
T [auth S201]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
T [auth S201]IPR002583Small ribosomal subunit protein bS20Family
B [auth S021]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth S021]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth S021]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth S021]IPR001865Small ribosomal subunit protein uS2Family
S [auth S191]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
S [auth S191]IPR002222Small ribosomal subunit protein uS19Family
S [auth S191]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth S191]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
R [auth S181]IPR001648Small ribosomal subunit protein bS18Family
R [auth S181]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth S181]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
Q [auth S171]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth S171]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
Q [auth S171]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth S171]IPR000266Small ribosomal subunit protein uS17Family
P [auth S161]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth S161]IPR000307Small ribosomal subunit protein bS16Family
P [auth S161]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
O [auth S151]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth S151]IPR000589Small ribosomal subunit protein uS15Family
O [auth S151]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
M [auth S131]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth S131]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth S131]IPR001892Small ribosomal subunit protein uS13Family
M [auth S131]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth S131]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
L [auth S121]IPR005679Ribosomal protein uS12, bacteriaFamily
L [auth S121]IPR006032Small ribosomal subunit protein uS12Family
L [auth S121]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth S111]IPR001971Small ribosomal subunit protein uS11Family
K [auth S111]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth S111]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
K [auth S111]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
J [auth S101]IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth S101]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth S101]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
J [auth S101]IPR001848Small ribosomal subunit protein uS10Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
CB [auth PTR1]2MG Parent Component: G

CB [auth PTR1]4SU Parent Component: U

CB [auth PTR1]5MU Parent Component: U

CB [auth PTR1]G7M Parent Component: G

CB [auth PTR1]PSU Parent Component: U

CB [auth PTR1]RSP Parent Component: C

AB [auth SPE1]FME Parent Component: MET

RESID:  AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
HA [auth L161]4D4 Parent Component: ARG

RESID:  AA0021 , AA0566

Y [auth L031]MEQ Parent Component: GLN

RESID:  AA0021 , AA0566 , AA0071

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N5-methyl-L-glutamine MOD:00080
V [auth 23S1]1MG Parent Component: G

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]2MA Parent Component: A

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]2MG Parent Component: G

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]3TD Parent Component: U

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]5MC Parent Component: C

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]5MU Parent Component: U

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]6MZ Parent Component: A

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]G7M Parent Component: G

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]OMC Parent Component: C

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]OMG Parent Component: G

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]OMU Parent Component: U

RESID:  AA0021 , AA0566 , AA0071

V [auth 23S1]PSU Parent Component: U

RESID:  AA0021 , AA0566 , AA0071

L [auth S121]D2T Parent Component: ASP

RESID:  AA0021 , AA0566 , AA0071

A [auth 16S1]2MG Parent Component: G

RESID:  AA0021 , AA0566 , AA0071

A [auth 16S1]4OC Parent Component: C

RESID:  AA0021 , AA0566 , AA0071

A [auth 16S1]5MC Parent Component: C

RESID:  AA0021 , AA0566 , AA0071

A [auth 16S1]G7M Parent Component: G

RESID:  AA0021 , AA0566 , AA0071

A [auth 16S1]MA6 Parent Component: A

RESID:  AA0021 , AA0566 , AA0071

A [auth 16S1]PSU Parent Component: U

RESID:  AA0021 , AA0566 , AA0071

A [auth 16S1]UR3 Parent Component: U

RESID:  AA0021 , AA0566 , AA0071