Annotations: 6SRI

Structure of the Fanconi anaemia core complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
UA [auth Q]	Tra1_central	e6sriQ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Tra1_central	ECOD (v295.2)
OA [auth q]	Herpes_U34	e6sriq01	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: Herpes_U34	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, Q [auth e]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100)	-	-	-
F, NA [auth Z], R [auth f]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100: chain F,f; base region, proposed FANCC-FANC-E-FANCF: chain Z)	-	-	-
CA [auth o], QA [auth O]	Unassigned secondary structure elements (proposed FANCB)	-	-	-
FA [auth V]	Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF)	-	-	-
GA [auth W]	Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF)	-	-	-
HA [auth X]	Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF)	-	-	-
IA [auth Y]	Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF)	-	-	-
SA [auth R]	Unassigned secondary structure elements (top region, proposed FANCG)	-	-	-
TA [auth S]	Unassigned secondary structure elements (top region, proposed FANCG)	-	-	-
I, U [auth i]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100)	-	-	-
H, J, T [auth h], V [auth j]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100)	-	-	-
G, S [auth g]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100)	-	-	-
D, P [auth d]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100)	-	-	-
C, O [auth c]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100)	-	-	-
PA [auth T]	base region, proposed FANCF	-	-	-
OA [auth q], UA [auth Q]	Fanconi anaemia protein FANCL	aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity transferase activity catalytic activity ubiquitin-protein transferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process metabolic process macromolecule metabolic process DNA repair interstrand cross-link repair cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process metabolic process macromolecule metabolic process DNA repair interstrand cross-link repair protein monoubiquitination protein ubiquitination macromolecule modification protein metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal	membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cytoplasm membrane-enclosed lumen intracellular organelle lumen nucleoplasm membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cytoplasm membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
MA [auth 4]	Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF)	-	-	-
KA [auth 2]	Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF)	-	-	-
JA [auth 1]	Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF)	-	-	-
B, N [auth b]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100)	-	-	-
EA [auth U]	Unassigned secondary structure elements (base region, proposed FANCC-FANC-E-FANCF)	-	-	-
DA [auth p], RA [auth P]	Unassigned secondary structure elements (proposed FAAP100)	-	-	-
BA [auth n], Z [auth N]	Unassigned secondary structure elements (proposed FAAP100)	-	-	-
AA [auth m], Y [auth M]	Unassigned secondary structure elements (proposed FANCB)	-	-	-
L, X [auth l]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100)	-	-	-
K, W [auth k]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100)	-	-	-
A, LA [auth 3], M [auth a]	Unassigned secondary structure elements (central region, proposed FANCB-FAAP100: chain A,a; base region, proposed FANCC-FANC-E-FANCF: chain 3)	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
OA [auth q], UA [auth Q]	IPR016135	Ubiquitin-conjugating enzyme/RWD-like	Homologous Superfamily
OA [auth q], UA [auth Q]	IPR026850	FANCL C-terminal domain	Domain
OA [auth q], UA [auth Q]	IPR019162	Fanconi anemia complex, subunit FancL, WD-repeat containing domain	Domain
OA [auth q], UA [auth Q]	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
OA [auth q], UA [auth Q]	IPR026848	E3 ubiquitin-protein ligase FANCL	Family
OA [auth q], UA [auth Q]	IPR044037	FANCL, UBC-like domain 3	Domain
OA [auth q], UA [auth Q]	IPR043003	FANCL, UBC-like domain 3 superfamily	Homologous Superfamily
OA [auth q], UA [auth Q]	IPR043898	FANCL, UBC-like domain 2	Domain
OA [auth q], UA [auth Q]	IPR001841	Zinc finger, RING-type	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6SRI | pdb_00006sri

Structure of the Fanconi anaemia core complex

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage