Annotations: 6SPD

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2 Family	Ribosomal protein L5	8094039	4001498	SCOP2 (2022-06-29)
F	SCOP2 Superfamily	RL5-like	8094040	3001709	SCOP2 (2022-06-29)
E	SCOP2B Superfamily	Ribosomal protein L4	8094757	3001146	SCOP2B (2022-06-29)
D	SCOP2 Family	Ribosomal protein L3	8093983	4002103	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Translational proteins	8093984	3000811	SCOP2 (2022-06-29)
FA [auth 6]	SCOP2B Superfamily	Ribosomal protein L36	8093874	3001346	SCOP2B (2022-06-29)
EA [auth 5]	SCOP2B Superfamily	L35p-like	8094943	3000790	SCOP2B (2022-06-29)
CA [auth 3]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8094409	3001320	SCOP2B (2022-06-29)
BA [auth 2]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8094060	3001320	SCOP2B (2022-06-29)
Z	SCOP2 Family	Ribosomal protein L30p/L7e	8095146	4001360	SCOP2 (2022-06-29)
Z	SCOP2 Superfamily	Ribosomal protein L30p/L7e	8095147	3001378	SCOP2 (2022-06-29)
X	SCOP2 Family	Ribosomal protein L28	8093919	4003961	SCOP2 (2022-06-29)
X	SCOP2 Superfamily	L28p-like	8093920	3001966	SCOP2 (2022-06-29)
W	SCOP2B Superfamily	Ribosomal L27 protein-like	8094659	3000539	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ribosomal protein L25-like	8096076	3001161	SCOP2B (2022-06-29)
U	SCOP2 Family	Ribosomal proteins L24p and L21e	8094790	4001752	SCOP2 (2022-06-29)
U	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8094791	3000334	SCOP2 (2022-06-29)
T	SCOP2B Superfamily	Ribosomal proteins S24e, L23 and L15e	8095263	3000210	SCOP2B (2022-06-29)
R	SCOP2 Family	Ribosomal protein l21p	8094077	4001630	SCOP2 (2022-06-29)
R	SCOP2 Superfamily	l21p-like	8094078	3002005	SCOP2 (2022-06-29)
Q	SCOP2B Superfamily	Ribosomal protein L20	8094481	3000563	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8094661	3000334	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Translational machinery components	8097668	3000571	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Prokaryotic ribosomal protein L17	8094543	3000995	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Ribosomal protein L16p/L10e	8094559	3000884	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Ribosomal proteins L15p and L18e	8094825	3001045	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	50S Ribosomal protein L14-like	8094459	3000433	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ribosomal protein L13	8094619	3001134	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I	Ribosomal_L11	e6spdI1	A: alpha arrays	X: HTH	H: HTH	T: Ribosomal protein L11, C-terminal domain	F: Ribosomal_L11	ECOD (1.6)
I	Ribosomal_L11_N	e6spdI2	A: a+b two layers	X: Ribosomal protein L11/L12e N-terminal domain-like	H: Ribosomal protein L11/L12e N-terminal domain (From Topology)	T: Ribosomal protein L11/L12e N-terminal domain	F: Ribosomal_L11_N	ECOD (1.6)
H	Ribosomal_L9_N	e6spdH1	A: a+b two layers	X: L9 N-domain-like	H: L9 N-domain-like (From Topology)	T: L9 N-domain-like	F: Ribosomal_L9_N	ECOD (1.6)
H	Ribosomal_L9_C_1	e6spdH2	A: a+b two layers	X: Ribosomal protein L9 C-domain (From Topology)	H: Ribosomal protein L9 C-domain (From Topology)	T: Ribosomal protein L9 C-domain	F: Ribosomal_L9_C_1	ECOD (1.6)
G	Ribosomal_L6	e6spdG1	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
G	Ribosomal_L6_1	e6spdG2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_1	ECOD (1.6)
F	Ribosomal_L5_C	e6spdF1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: Ribosomal_L5_C	ECOD (1.6)
E	Ribosomal_L4	e6spdE1	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)
D	Ribosomal_L3	e6spdD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)
FA [auth 6]	Ribosomal_L36	e6spd61	A: few secondary structure elements	X: Ribosomal protein L36 (From Topology)	H: Ribosomal protein L36 (From Topology)	T: Ribosomal protein L36	F: Ribosomal_L36	ECOD (1.6)
EA [auth 5]	Ribosomal_L35p	e6spd51	A: a+b two layers	X: Ribosomal protein L35p (From Topology)	H: Ribosomal protein L35p (From Topology)	T: Ribosomal protein L35p	F: Ribosomal_L35p	ECOD (1.6)
DA [auth 4]	Ribosomal_L34	e6spd41	A: extended segments	X: 50S ribosomal protein L34 (From Topology)	H: 50S ribosomal protein L34 (From Topology)	T: 50S ribosomal protein L34	F: Ribosomal_L34	ECOD (1.6)
C	Ribosomal_L2_1	e6spdC1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
C	Ribosomal_L2_C	e6spdC2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C	ECOD (1.6)
CA [auth 3]	Ribosomal_L33	e6spd31	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L33	ECOD (1.6)
BA [auth 2]	Ribosomal_L32p	e6spd21	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L32p	ECOD (1.6)
AA [auth 1]	Ribosomal_L31	e6spd11	A: few secondary structure elements	X: Ribosomal protein L31p (From Topology)	H: Ribosomal protein L31p (From Topology)	T: Ribosomal protein L31p	F: Ribosomal_L31	ECOD (1.6)
Z	Ribosomal_L30	e6spdZ1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30	ECOD (1.6)
Y	Ribosomal_L29	e6spdY1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: Ribosomal_L29	ECOD (1.6)
X	Ribosomal_L28	e6spdX1	A: few secondary structure elements	X: Ribosomal protein bL28-related (From Homology)	H: Ribosomal protein bL28-related	T: Ribosomal protein L28	F: Ribosomal_L28	ECOD (1.6)
W	Ribosomal_L27	e6spdW1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal L27 protein	F: Ribosomal_L27	ECOD (1.6)
V	Ribosomal_L25p	e6spdV1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_L25p	ECOD (1.6)
V	Ribosomal_TL5_C	e6spdV2	A: a+b complex topology	X: Ribosomal protein TL5/L25 C-terminal domain-like	H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)	T: Ribosomal protein TL5/L25 C-terminal domain-related	F: Ribosomal_TL5_C	ECOD (1.6)
U	ribosomal_L24_1	e6spdU1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: ribosomal_L24_1	ECOD (1.6)
T	Ribosomal_L23_2	e6spdT1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L23_2	ECOD (1.6)
S	Ribosomal_L22	e6spdS1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: Ribosomal_L22	ECOD (1.6)
R	Ribosomal_L21p	e6spdR1	A: beta barrels	X: Ribosomal protein L21p (From Topology)	H: Ribosomal protein L21p (From Topology)	T: Ribosomal protein L21p	F: Ribosomal_L21p	ECOD (1.6)
Q	Ribosomal_L20	e6spdQ1	A: alpha arrays	X: PABP domain-like	H: Ribosomal protein L20 (From Topology)	T: Ribosomal protein L20	F: Ribosomal_L20	ECOD (1.6)
P	Ribosomal_L19	e6spdP1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L19	ECOD (1.6)
O	Ribosomal_L18p	e6spdO1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_L18p	ECOD (1.6)
N	Ribosomal_L17_1	e6spdN1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Prokaryotic ribosomal protein L17 (From Topology)	T: Prokaryotic ribosomal protein L17	F: Ribosomal_L17_1	ECOD (1.6)
M	Ribosomal_L16	e6spdM1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
L	Ribosomal_L27A	e6spdL1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L27A	ECOD (1.6)
K	Ribosomal_L14	e6spdK1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
J	Ribosomal_L13	e6spdJ1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
G	3.90.930.12	Alpha Beta	Alpha-Beta Complex	Outer Surface Protein A	domain 3	CATH (utative)
DA [auth 4]	1.10.287.3980	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (utative)
CA [auth 3]	2.20.28.120	Mainly Beta	Single Sheet	Rubrerythrin, domain 2	Ribosomal protein L33	CATH (utative)
Z	3.30.1390.20	Alpha Beta	2-Layer Sandwich	Ribosomal Protein L30	Chain: A,	CATH (utative)
X	2.30.170.40	Mainly Beta	Roll	Ribosomal Protein L24e	Chain: T	CATH (utative)
V	2.170.120.20	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit	Chain A, domain 2	CATH (utative)
T	3.30.70.330	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	RRM (RNA recognition motif) domain	CATH (utative)
S	3.90.470.10	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L22	Chain A	CATH (utative)
N	3.90.1030.10	Alpha Beta	Alpha-Beta Complex	50s Ribosomal Protein L17	Chain: A,	CATH (utative)
M	3.90.1170.10	Alpha Beta	Alpha-Beta Complex	Aldehyde Oxidoreductase	domain 3	CATH (utative)
K	2.40.150.20	Mainly Beta	Beta Barrel	Ribosomal Protein L14	Ribosomal protein L14/L23	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I	50S ribosomal protein L11	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
H	50S ribosomal protein L9	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
G	50S ribosomal protein L6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
F	50S ribosomal protein L5	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
E	50S ribosomal protein L4	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
D	50S ribosomal protein L3	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
FA [auth 6]	50S ribosomal protein L36	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
EA [auth 5]	50S ribosomal protein L35	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
DA [auth 4]	50S ribosomal protein L34	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
C	50S ribosomal protein L2	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
CA [auth 3]	50S ribosomal protein L33	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
BA [auth 2]	50S ribosomal protein L32	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
AA [auth 1]	50S ribosomal protein L31	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Z	50S ribosomal protein L30	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Y	Ribosomal protein uL29	-	-	-
X	50S ribosomal protein L28	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
W	50S ribosomal protein L27	structural molecule activity structural constituent of ribosome ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly assembly of large subunit precursor of preribosome protein-containing complex assembly ribosomal large subunit assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly assembly of large subunit precursor of preribosome protein-containing complex assembly ribosomal large subunit assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
V	50S ribosomal protein L25	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
U	50S ribosomal protein L24	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
T	50S ribosomal protein L23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
B	5S ribosomal RNA	-	-	-
S	50S ribosomal protein L22	-	-	-
R	50S ribosomal protein L21	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
Q	50S ribosomal protein L20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
P	50S ribosomal protein L19	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
O	50S ribosomal protein L18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N	50S ribosomal protein L17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
M	50S ribosomal protein L16	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L	50S ribosomal protein L15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
K	50S ribosomal protein L14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J	50S ribosomal protein L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
A	23S ribosomal RNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I	IPR020785	Large ribosomal subunit protein uL11, conserved site	Conserved Site
I	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
I	IPR000911	Ribosomal protein uL11	Family
I	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
I	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
I	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
I	IPR006519	Large ribosomal subunit protein uL11, bacteria	Family
H	IPR009027	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Homologous Superfamily
H	IPR020594	Large ribosomal subunit protein bL9, bacteria/chloroplast	Family
H	IPR036935	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Homologous Superfamily
H	IPR036791	Large ribosomal subunit protein bL9, C-terminal domain superfamily	Homologous Superfamily
H	IPR020069	Large ribosomal subunit protein bL9, C-terminal	Domain
H	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
H	IPR000244	Large ribosomal subunit protein bL9	Family
G	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
G	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
G	IPR000702	Large ribosomal subunit protein uL6-like	Family
G	IPR019906	Large ribosomal subunit protein uL6, bacteria	Family
G	IPR002358	Large ribosomal subunit protein uL6, conserved site	Conserved Site
F	IPR020929	Large ribosomal subunit protein uL5, conserved site	Conserved Site
F	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
F	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
F	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
F	IPR002132	Large ribosomal subunit protein uL5	Family
F	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family
E	IPR013005	Large ribosomal subunit protein uL4-like	Family
E	IPR002136	Large ribosomal subunit protein uL4	Family
E	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
D	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
D	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
D	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
D	IPR000597	Large ribosomal subunit protein uL3	Family
FA [auth 6]	IPR000473	Large ribosomal subunit protein bL36	Family
FA [auth 6]	IPR035977	Large ribosomal subunit protein bL36 superfamily	Homologous Superfamily
EA [auth 5]	IPR021137	Large ribosomal subunit protein bL35-like	Family
EA [auth 5]	IPR018265	Large ribosomal subunit protein bL35, conserved site	Conserved Site
EA [auth 5]	IPR001706	Large ribosomal subunit protein bL35	Family
EA [auth 5]	IPR037229	Large ribosomal subunit protein bL35 superfamily	Homologous Superfamily
DA [auth 4]	IPR020939	Large ribosomal subunit protein bL34, conserved site	Conserved Site
DA [auth 4]	IPR000271	Large ribosomal subunit protein bL34	Family
C	IPR005880	Large ribosomal subunit protein uL2, bacteria/organella	Family
C	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
C	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
C	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
C	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
C	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
C	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
C	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
C	IPR002171	Large ribosomal subunit protein uL2	Family
CA [auth 3]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
CA [auth 3]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
CA [auth 3]	IPR001705	Large ribosomal subunit protein bL33	Family
CA [auth 3]	IPR018264	Large ribosomal subunit protein bL33, conserved site	Conserved Site
BA [auth 2]	IPR002677	Large ribosomal subunit protein bL32	Family
BA [auth 2]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
BA [auth 2]	IPR044957	Large ribosomal subunit protein bL32, bacteria	Family
AA [auth 1]	IPR002150	Large ribosomal subunit protein bL31 type A/B	Family
AA [auth 1]	IPR027491	Large ribosomal subunit protein bL31 type A	Family
AA [auth 1]	IPR042105	Large ribosomal subunit protein bL31 superfamily	Homologous Superfamily
AA [auth 1]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
Z	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
Z	IPR005996	Large ribosomal subunit protein uL30, bacteria	Family
Z	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
X	IPR037147	Large ribosomal subunit protein bL28 superfamily	Homologous Superfamily
X	IPR001383	Large ribosomal subunit protein bL28, bacteria	Family
X	IPR026569	Large ribosomal subunit protein bL28	Family
X	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
W	IPR001684	Large ribosomal subunit protein bL27	Family
W	IPR018261	Large ribosomal subunit protein bL27, conserved site	Conserved Site
V	IPR011035	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Homologous Superfamily
V	IPR001021	Ribosomal protein bL25, long-form	Family
V	IPR029751	Large ribosomal subunit protein bL25, L25 domain	Domain
V	IPR037121	Large ribosomal subunit protein bL25, C-terminal	Homologous Superfamily
V	IPR020057	Large ribosomal subunit protein bL25, beta domain	Domain
V	IPR020056	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal	Homologous Superfamily
V	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family
U	IPR057264	Large ribosomal subunit protein uL24, C-terminal domain	Domain
U	IPR003256	Large ribosomal subunit protein uL24	Family
U	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
U	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
U	IPR005824	KOW	Domain
U	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
U	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
T	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
T	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
T	IPR013025	Large ribosomal subunit protein uL23-like	Family
R	IPR028909	Large ribosomal subunit protein bL21-like	Family
R	IPR001787	Large ribosomal subunit protein bL21	Family
R	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
R	IPR018258	Large ribosomal subunit protein bL21, conserved site	Conserved Site
Q	IPR049946	Large ribosomal subunit protein bL20, conserved site	Conserved Site
Q	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
Q	IPR005813	Large ribosomal subunit protein bL20	Family
P	IPR001857	Large ribosomal subunit protein bL19	Family
P	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
P	IPR018257	Large ribosomal subunit protein bL19, conserved site	Conserved Site
P	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
O	IPR005484	Large ribosomal subunit protein uL18, bacterial/plantae/animalia	Family
O	IPR057268	Large ribosomal subunit protein uL18	Family
O	IPR004389	Large ribosomal subunit protein uL18, bacteria	Family
N	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
N	IPR047859	Large ribosomal subunit protein bL17, conserved site	Conserved Site
N	IPR000456	Large ribosomal subunit protein bL17	Family
M	IPR000114	Large ribosomal subunit protein uL16, bacteria	Family
M	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
M	IPR020798	Large ribosomal subunit protein uL16, conserved site	Conserved Site
M	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
M	IPR047873	Large ribosomal subunit protein uL16	Family
L	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
L	IPR030878	Large ribosomal subunit protein uL15	Family
L	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
L	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
L	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
K	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
K	IPR000218	Large ribosomal subunit protein uL14	Family
K	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
K	IPR005745	Large ribosomal subunit protein uL14, bacteria	Family
J	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
J	IPR005822	Large ribosomal subunit protein uL13	Family
J	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
J	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily