6SGF | pdb_00006sgf

Molecular insight into a new low affinity xylan binding module CBM86, from the xylanolytic gut symbiont Roseburia intestinalis.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FATP-synte6sgfF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (v294.1)
EATP-synte6sgfE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (v294.1)
DParvo_coate6sgfD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)
CATP-synte6sgfC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: ATP-syntECOD (v294.1)
AParvo_coate6sgfA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Parvo_coatECOD (v294.1)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR010502Carbohydrate-binding domain, family 9Domain
A, B, C, D, E
IPR003305Carbohydrate-binding, CenC-likeDomain
A, B, C, D, E
IPR013378Internalin B-like, B-repeatRepeat
A, B, C, D, E
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B, C, D, E
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR042229Listeria-Bacteroides repeat domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR003343Bacterial Ig-like domain, group 2Domain
A, B, C, D, E
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B, C, D, E
IPR044846Glycoside hydrolase family 10Family
A, B, C, D, E
IPR001000Glycoside hydrolase family 10 domainDomain
A, B, C, D, E
IPR036116Fibronectin type III superfamilyHomologous Superfamily
A, B, C, D, E
IPR008964Invasin/intimin cell-adhesion fragmentsHomologous Superfamily