6SD4 | pdb_00006sd4

Structure of the RBM3/collar region of the Salmonella flagella MS-ring protein FliF with 34-fold symmetry applied

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I	e6sd4I1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
Z	e6sd4Z1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
Y	e6sd4Y1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
X	e6sd4X1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
W	e6sd4W1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
V	e6sd4V1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
U	e6sd4U1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
T	e6sd4T1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
S	e6sd4S1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
R	e6sd4R1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
Q	e6sd4Q1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
P	e6sd4P1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
O	e6sd4O1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
N	e6sd4N1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
M	e6sd4M1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
L	e6sd4L1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
K	e6sd4K1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
J	e6sd4J1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
HA [auth h]	e6sd4h1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
H	e6sd4H1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
GA [auth g]	e6sd4g1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
G	e6sd4G1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
FA [auth f]	e6sd4f1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
F	e6sd4F1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
EA [auth e]	e6sd4e1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
E	e6sd4E1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
DA [auth d]	e6sd4d1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
D	e6sd4D1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
CA [auth c]	e6sd4c1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
C	e6sd4C1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
BA [auth b]	e6sd4b1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
B	e6sd4B1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
AA [auth a]	e6sd4a1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)
A	e6sd4A1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: 7tm_2	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	PF08345	Flagellar M-ring protein C-terminal (YscJ_FliF_C)	Flagellar M-ring protein C-terminal	This is the RBM3/beta-collar domain found in bacterial flagellar M-ring (FliF) proteins [1] which also have the YscJ/FliF domain (Pfam:PF01514) at the N-terminal.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	Flagellar M-ring protein	cytoskeletal motor activity	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cell periphery cellular anatomical structure plasma membrane membrane bacterial-type flagellum basal body cell projection bacterial-type flagellum basal body, MS ring organelle membraneless organelle bacterial-type flagellum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR006182	Flagellar M-ring, N-terminal	Domain
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR045851	AMP-binding enzyme domain superfamily	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR013556	Flagellar M-ring C-terminal	Domain
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR043427	Lipoprotein YscJ/Flagellar M-ring protein	Family
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR000067	Flagellar M-ring protein FliF	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, AA [auth a], B, BA [auth b], C A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Type III Secretion Systems	MS-ring of the flagellar rotor protein FliF, 33mer