6S29 | pdb_00006s29

Structure of fission yeast Mis16-Mis19 complex

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d6s29c_	All beta proteins	7-bladed beta-propeller	WD40 repeat-like	automated matches	automated matches	Fission yeast (Schizosaccharomyces pombe ) [TaxId: 4896 ],	SCOPe (2.08)
A	d6s29a_	All beta proteins	7-bladed beta-propeller	WD40 repeat-like	automated matches	automated matches	Fission yeast (Schizosaccharomyces pombe ) [TaxId: 4896 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Bystin	e6s29C1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: Bystin	ECOD (v294.1)
A	Bystin	e6s29A1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: Bystin	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	2.130.10.10	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (utative)
A	2.130.10.10	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C	PF12265	Histone-binding protein RBBP4 or subunit C of CAF1 complex (CAF1C_H4-bd)	Histone-binding protein RBBP4 or subunit C of CAF1 complex	-	Repeat
A, C	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D	CENP-A recruiting complex protein mis19	-	organelle assembly protein-containing complex organization chromosome organization membraneless organelle assembly CENP-A containing chromatin assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly chromatin organization kinetochore assembly protein-containing complex assembly kinetochore organization cellular process organelle assembly protein-containing complex organization chromosome organization membraneless organelle assembly CENP-A containing chromatin assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly chromatin organization kinetochore assembly protein-containing complex assembly kinetochore organization cellular process cellular component organization or biogenesis mitotic metaphase chromosome alignment mitotic cell cycle metaphase chromosome alignment localization chromosome localization organelle localization mitotic sister chromatid segregation cell cycle chromosome segregation cell cycle process mitotic nuclear division attachment of spindle microtubules to kinetochore organelle fission attachment of mitotic spindle microtubules to kinetochore sister chromatid segregation nuclear division mitotic cell cycle process nuclear chromosome segregation cell division	intracellular organelle chromosome, centromeric core domain cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome, centromeric region chromosome chromosomal region kinetochore condensed chromosome, centromeric region supramolecular complex condensed chromosome intracellular organelle chromosome, centromeric core domain cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome, centromeric region chromosome chromosomal region kinetochore condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle protein-containing complex CENP-A recruiting complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
A, C	Histone acetyltransferase type B subunit 2	protein binding binding histone binding H3-H4 histone complex chaperone activity histone chaperone activity protein carrier activity molecular carrier activity	organelle assembly protein-containing complex organization chromosome organization membraneless organelle assembly CENP-A containing chromatin assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly chromatin organization kinetochore assembly protein-containing complex assembly kinetochore organization cellular process organelle assembly protein-containing complex organization chromosome organization membraneless organelle assembly CENP-A containing chromatin assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly chromatin organization kinetochore assembly protein-containing complex assembly kinetochore organization cellular process cellular component organization or biogenesis chromatin remodeling	intracellular anatomical structure intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle intracellular anatomical structure intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle protein-containing complex CENP-A recruiting complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C	IPR050459	WD repeat RBAP46/RBAP48/MSI1	Family
A, C	IPR019775	WD40 repeat, conserved site	Conserved Site
A, C	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A, C	IPR059104	EIPR1-like, beta-propeller	Domain
A, C	IPR022052	Histone-binding protein RBBP4-like, N-terminal	Domain
A, C	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
A, C	IPR001680	WD40 repeat	Repeat
A, C	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.