6S09 | pdb_00006s09

C-terminally extended and N-terminally truncated variant of FimA E. coli at 1.5 Angstrom resolution

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth B]	SCOP2B Superfamily	Bacterial adhesin-like	8098074	3000723	SCOP2B (2022-06-29)
D [auth C]	SCOP2B Superfamily	Bacterial adhesin-like	8098074	3000723	SCOP2B (2022-06-29)
F [auth E]	SCOP2 Family	Pilus subunits	8098073	4002034	SCOP2 (2022-06-29)
F [auth E]	SCOP2 Superfamily	Bacterial adhesin-like	8098074	3000723	SCOP2 (2022-06-29)
G	SCOP2B Superfamily	Bacterial adhesin-like	8098074	3000723	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Bacterial adhesin-like	8098074	3000723	SCOP2B (2022-06-29)
E [auth D]	SCOP2B Superfamily	Bacterial adhesin-like	8098074	3000723	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	Bacterial adhesin-like	8098074	3000723	SCOP2B (2022-06-29)
A [auth F]	SCOP2B Superfamily	Bacterial adhesin-like	8098074	3000723	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth B]	Fimbrial_1	e6s09B1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fimbrial_1	ECOD (1.6)
D [auth C]	Fimbrial_1	e6s09C1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fimbrial_1	ECOD (1.6)
F [auth E]	Fimbrial_1	e6s09E1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fimbrial_1	ECOD (1.6)
G	Fimbrial_1	e6s09G1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fimbrial_1	ECOD (1.6)
H	Fimbrial_1	e6s09H1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fimbrial_1	ECOD (1.6)
E [auth D]	Fimbrial_1	e6s09D1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fimbrial_1	ECOD (1.6)
B [auth A]	Fimbrial_1	e6s09A1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fimbrial_1	ECOD (1.6)
A [auth F]	Fimbrial_1	e6s09F1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Fimbrial_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth B]	2.60.40.1090	Mainly Beta	Sandwich	Immunoglobulin-like	Fimbrial-type adhesion domain	CATH (utative)
D [auth C]	2.60.40.1090	Mainly Beta	Sandwich	Immunoglobulin-like	Fimbrial-type adhesion domain	CATH (utative)
F [auth E]	2.60.40.1090	Mainly Beta	Sandwich	Immunoglobulin-like	Fimbrial-type adhesion domain	CATH (utative)
G	2.60.40.1090	Mainly Beta	Sandwich	Immunoglobulin-like	Fimbrial-type adhesion domain	CATH (utative)
H	2.60.40.1090	Mainly Beta	Sandwich	Immunoglobulin-like	Fimbrial-type adhesion domain	CATH (utative)
E [auth D]	2.60.40.1090	Mainly Beta	Sandwich	Immunoglobulin-like	Fimbrial-type adhesion domain	CATH (utative)
B [auth A]	2.60.40.1090	Mainly Beta	Sandwich	Immunoglobulin-like	Fimbrial-type adhesion domain	CATH (utative)
A [auth F]	2.60.40.1090	Mainly Beta	Sandwich	Immunoglobulin-like	Fimbrial-type adhesion domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], F [auth E], G, H	PF00419	Fimbrial protein (Fimbrial)	Fimbrial protein		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], F [auth E], G, H	FimA	identical protein binding protein binding binding	cell adhesion involved in biofilm formation cell aggregation biofilm formation biological process involved in intraspecies interaction between organisms cell-substrate adhesion single-species biofilm formation aggregation of unicellular organisms submerged biofilm formation cell adhesion involved in single-species biofilm formation cell adhesion cellular process single-species submerged biofilm formation	pilus cell projection cellular anatomical structure

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], F [auth E], G, H	IPR000259	Fimbrial-type adhesion domain	Domain
A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], F [auth E], G, H	IPR036937	Fimbrial-type adhesion domain superfamily	Homologous Superfamily
A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], F [auth E], G, H	IPR050263	Bacterial Fimbrial Adherence	Family
A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], A [auth F], B [auth A], C [auth B], D [auth C], E [auth D], F [auth E], G, H	IPR008966	Adhesion domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.