6RSQ | pdb_00006rsq

Helical folded domain of mouse CAP1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6rsqa1	All alpha proteins	N-terminal domain of adenylylcyclase associated protein, CAP	N-terminal domain of adenylylcyclase associated protein, CAP	automated matches	automated matches	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A	d6rsqa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
B	d6rsqb1	All alpha proteins	N-terminal domain of adenylylcyclase associated protein, CAP	N-terminal domain of adenylylcyclase associated protein, CAP	automated matches	automated matches	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
B	d6rsqb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
C	d6rsqc1	All alpha proteins	N-terminal domain of adenylylcyclase associated protein, CAP	N-terminal domain of adenylylcyclase associated protein, CAP	automated matches	automated matches	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
C	d6rsqc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
D	d6rsqd1	All alpha proteins	N-terminal domain of adenylylcyclase associated protein, CAP	N-terminal domain of adenylylcyclase associated protein, CAP	automated matches	automated matches	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
D	d6rsqd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ATP-synt	e6rsqA1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: ATP-synt	ECOD (v294.1)
B	ATP-synt	e6rsqB1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: ATP-synt	ECOD (v294.1)
C	ATP-synt	e6rsqC1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: ATP-synt	ECOD (v294.1)
D	ATP-synt	e6rsqD1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: ATP-synt	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.25.40.330	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Adenylate cyclase-associated CAP, N-terminal domain	CATH (utative)
B	1.25.40.330	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Adenylate cyclase-associated CAP, N-terminal domain	CATH (utative)
C	1.25.40.330	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Adenylate cyclase-associated CAP, N-terminal domain	CATH (utative)
D	1.25.40.330	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Adenylate cyclase-associated CAP, N-terminal domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF21938	CAP, N-terminal domain (CAP_N)	CAP, N-terminal domain	Cyclase-associated proteins (CAPs) are highly conserved actin-binding proteins present in a wide range of organisms including yeast, fly, plants, and mammals. CAPs are multifunctional proteins that regulate actin remodelling in response to cellular s ...	Cyclase-associated proteins (CAPs) are highly conserved actin-binding proteins present in a wide range of organisms including yeast, fly, plants, and mammals. CAPs are multifunctional proteins that regulate actin remodelling in response to cellular signals [1]. They consist of an N-terminal conserved motif (Pfam:PF01213) followed by an N-terminal and C-terminal domains which are separated by a Pro-rich region. This entry represents the N-terminal domain which contains the adenylyl cyclase binding site and has an all-alpha structure consisting of six helices in a bundle with a left-handed twist and up-and-down topology [1-3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Adenylyl cyclase-associated protein 1	protein binding binding enzyme binding adenylate cyclase binding cytoskeletal protein binding actin binding	ameboidal-type cell migration cell migration cellular process cell motility cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization cell junction organization modification of postsynaptic actin cytoskeleton synapse organization modification of postsynaptic structure ameboidal-type cell migration cell migration cellular process cell motility cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization cell junction organization modification of postsynaptic actin cytoskeleton synapse organization modification of postsynaptic structure modification of synaptic structure developmental process anatomical structure morphogenesis anatomical structure development cell morphogenesis actin filament organization supramolecular fiber organization localization import into cell transport receptor-mediated endocytosis endocytosis establishment of localization vesicle-mediated transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane presynapse synapse cell junction glutamatergic synapse cell cortex cortical cytoskeleton intracellular membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane presynapse synapse cell junction glutamatergic synapse cell cortex cortical cytoskeleton intracellular membraneless organelle actin cytoskeleton intracellular organelle cytoskeleton organelle membraneless organelle cortical actin cytoskeleton extracellular region postsynapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR017901	C-CAP/cofactor C-like domain	Domain
A, B, C, D	IPR018106	CAP, conserved site, N-terminal	Conserved Site
A, B, C, D	IPR028417	CAP, conserved site, C-terminal	Conserved Site
A, B, C, D	IPR013912	Adenylate cyclase-associated CAP, C-terminal	Domain
A, B, C, D	IPR013992	Adenylate cyclase-associated CAP, N-terminal	Conserved Site
A, B, C, D	IPR036223	Adenylate cyclase-associated CAP, C-terminal superfamily	Homologous Superfamily
A, B, C, D	IPR001837	Adenylate cyclase-associated CAP	Family
A, B, C, D	IPR006599	CARP motif	Domain
A, B, C, D	IPR016098	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	Homologous Superfamily
A, B, C, D	IPR036222	Adenylate cyclase-associated CAP, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D	IPR053950	CAP, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.