6RMU
Crystal structure of disulphide-linked human C3d dimer in complex with Staphylococcus aureus complement subversion protein Sbi-IV
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6rmua_ | All alpha proteins | alpha/alpha toroid | Terpenoid cyclases/Protein prenyltransferases | Complement components | Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth B] | d6rmub_ | All alpha proteins | alpha/alpha toroid | Terpenoid cyclases/Protein prenyltransferases | Complement components | Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8038414 | 3001024 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8038414 | 3001024 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF07678 | e6rmuA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: PF07678 | ECOD (1.6) |
C [auth B] | PF07678 | e6rmuB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: PF07678 | ECOD (1.6) |
B [auth C] | PF11621 | e6rmuC1 | A: alpha bundles | X: Spectrin repeat-like | H: Sbi complement-binding domain (From Topology) | T: Sbi complement-binding domain | F: PF11621 | ECOD (1.6) |
D | PF11621 | e6rmuD1 | A: alpha bundles | X: Spectrin repeat-like | H: Sbi complement-binding domain (From Topology) | T: Sbi complement-binding domain | F: PF11621 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF07678 | A-macroglobulin TED domain (TED_complement) | A-macroglobulin TED domain | - | Repeat |