6R7G | pdb_00006r7g

Atomic structure of potato virus X, the prototype of the Alphaflexiviridae family

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
M	Flexi_CP	e6r7gM1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
L	Flexi_CP	e6r7gL1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
K	Flexi_CP	e6r7gK1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
J	Flexi_CP	e6r7gJ1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
I	Flexi_CP	e6r7gI1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
H	Flexi_CP	e6r7gH1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
G	Flexi_CP	e6r7gG1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
F	Flexi_CP	e6r7gF1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
E	Flexi_CP	e6r7gE1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
D	Flexi_CP	e6r7gD1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
C	Flexi_CP	e6r7gC1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
B	Flexi_CP	e6r7gB1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)
A	Flexi_CP	e6r7gA1	A: alpha complex topology	X: Rift Valley fever virus nucleocapsid protein-related (From Homology)	H: Rift Valley fever virus nucleocapsid protein-related	T: Papaya mosaic virus capsid protein	F: Flexi_CP	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M	PF00286	Viral coat protein (Flexi_CP)	Viral coat protein	Family includes coat proteins from Potexviruses and carlaviruses.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
N [auth R]	polyU RNA	-	-	-
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M	Coat protein	structural molecule activity	-	protein-containing complex ribonucleoprotein complex viral capsid virion component helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M	IPR000052	Potex/carlavirus coat protein	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.