6QYY | pdb_00006qyy

The crystal structure of head fiber gp8.5 N base in bacteriophage phi29


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APhage_head_fibre6qyyA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: Head decoration protein D (gpD, major capsid protein D)T: Head decoration protein D (gpD, major capsid protein D)F: Phage_head_fibrECOD (v294.1)
APhage_head_fibre6qyyA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: Phage_head_fibrECOD (v294.1)
BHelicase_Ce6qyyB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_CECOD (v294.1)
CHelicase_Ce6qyyC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_CECOD (v294.1)
DHelicase_Ce6qyyD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_CECOD (v294.1)
EHelicase_Ce6qyyE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_CECOD (v294.1)
FHelicase_Ce6qyyF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_CECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF11133Head fiber protein (Phage_head_fibr)Head fiber protein- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR022741Bacteriophage B103, Gp8, head fibreFamily