6QXT | pdb_00006qxt

Cas1-Cas2-Csn2-DNA dimer complex from the Type II-A CRISPR-Cas system


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ZA [auth z]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
YA [auth y]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
VA [auth v]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
UA [auth u]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
USCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
SA [auth s]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
RA [auth r]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
MSCOP2 FamilyCRISPR associated protein Cas1 8093959 4006578 SCOP2 (2022-06-29)
MSCOP2 SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2 (2022-06-29)
LA [auth l]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyCRISPR associated protein Cas1 8093960 3002164 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyABC transporter-like P-loop ATPases 8095109 3002020 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
XA [auth x]Arf, G-alphae6qxtx1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
XArf, G-alphae6qxtX1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
WA [auth w]Arf, G-alphae6qxtw1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
WArf, G-alphae6qxtW1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
TA [auth t]Arf, G-alphae6qxtt1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
TArf, G-alphae6qxtT1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
QA [auth q]Arf, G-alphae6qxtq1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
QArf, G-alphae6qxtQ1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
NA [auth n]Arf, G-alphae6qxtn1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
NArf, G-alphae6qxtN1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
KA [auth k]Arf, G-alphae6qxtk1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
KArf, G-alphae6qxtK1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
ZA [auth z]Arf, G-alphae6qxtz1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
ZArf, G-alphae6qxtZ1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
YA [auth y]Arf, G-alphae6qxty1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
YArf, G-alphae6qxtY1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
VA [auth v]Arf, G-alphae6qxtv1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
VArf, G-alphae6qxtV1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
UA [auth u]Arf, G-alphae6qxtu1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
UArf, G-alphae6qxtU1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
SA [auth s]Arf, G-alphae6qxts1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
SArf, G-alphae6qxtS1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
RA [auth r]Arf, G-alphae6qxtr1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
RArf, G-alphae6qxtR1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
PA [auth p]Arf, G-alphae6qxtp1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
PArf, G-alphae6qxtP1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
OA [auth o]Arf, G-alphae6qxto1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
OArf, G-alphae6qxtO1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
MA [auth m]Arf, G-alphae6qxtm1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
MArf, G-alphae6qxtM1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
LA [auth l]Arf, G-alphae6qxtl1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
LArf, G-alphae6qxtL1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
JA [auth j]Arf, G-alphae6qxtj1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
JArf, G-alphae6qxtJ1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
IA [auth i]Arf, G-alphae6qxti1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
IArf, G-alphae6qxtI1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
HA [auth h]Arf, G-alphae6qxth1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
HArf, G-alphae6qxtH1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
GA [auth g]Arf, G-alphae6qxtg1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
GArf, G-alphae6qxtG1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
FA [auth f]Arf, G-alphae6qxtf1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
FArf, G-alphae6qxtF1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
EA [auth e]Arf, G-alphae6qxte1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
EArf, G-alphae6qxtE1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
DA [auth d]Arf, G-alphae6qxtd1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
DArf, G-alphae6qxtD1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
CA [auth c]Arf, G-alphae6qxtc1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
CArf, G-alphae6qxtC1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
BA [auth b]Arf, G-alphae6qxtb1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
BArf, G-alphae6qxtB1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
AA [auth a]Arf, G-alphae6qxta1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)
AArf, G-alphae6qxtA1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Arf, G-alphaECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
BB [auth 2]DNA (64-MER)---
AB [auth 1]DNA (64-MER)---
CRISPR-associated endoribonuclease Cas2 -
CRISPR-associated endonuclease Cas1 -
CRISPR-associated protein Csn2 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR019199Virulence-associated protein D / CRISPR associated protein Cas2Family
IPR021127CRISPR-associated endonuclease Cas2Family
IPR002729CRISPR-associated protein Cas1Family
IPR019855CRISPR-associated protein Cas1, NMENI subtypeFamily
IPR042206CRISPR-associated endonuclease Cas1, C-terminal domainHomologous Superfamily
IPR050646CRISPR-associated endonuclease Cas1Family
IPR010146CRISPR-associated protein, Csn2-typeFamily
IPR038600CRISPR-associated protein Csn2 superfamilyHomologous Superfamily