6QCM | pdb_00006qcm

Cryo em structure of the Listeria stressosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
AB [auth g]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
BB [auth h]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
CB [auth i]SCOP2 FamilyAnti-sigma factor antagonist SpoIIaa 8100355 4003567 SCOP2 (2022-06-29)
CB [auth i]SCOP2 SuperfamilySpoIIaa-like 8100356 3001065 SCOP2 (2022-06-29)
DB [auth j]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
KA [auth A]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
LA [auth B]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
MA [auth C]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
NA [auth D]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
OA [auth I]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
PA [auth J]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
QA [auth N]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
RA [auth O]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
SA [auth R]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
TA [auth S]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
UA [auth a]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
VA [auth b]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
WA [auth c]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
XA [auth d]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
YA [auth e]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)
ZA [auth f]SCOP2B SuperfamilySpoIIaa-like 8100356 3001065 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth AB]IstB_IS21e6qcmAB01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: IstB_IS21ECOD (v294.2)
AA [auth T]MIF4Ge6qcmT1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
B [auth BC]MIF4Ge6qcmBC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
BA [auth TB]MIF4Ge6qcmTB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
CA [auth U]MIF4Ge6qcmU1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
DA [auth UB]MIF4Ge6qcmUB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
E [auth DC]MIF4Ge6qcmDC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
EA [auth V]MIF4Ge6qcmV1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
FA [auth VB]MIF4Ge6qcmVB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
G [auth EB]MIF4Ge6qcmEB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
GA [auth W]MIF4Ge6qcmW1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
HA [auth X]MIF4Ge6qcmX1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
I [auth FA]MIF4Ge6qcmFA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
IA [auth Y]MIF4Ge6qcmY1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
J [auth FB]MIF4Ge6qcmFB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
JA [auth Z]MIF4Ge6qcmZ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
K [auth FC]MIF4Ge6qcmFC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
M [auth GC]MIF4Ge6qcmGC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
N [auth HC]MIF4Ge6qcmHC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
P [auth IC]MIF4Ge6qcmIC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
Q [auth K]MIF4Ge6qcmK1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
R [auth KB]MIF4Ge6qcmKB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
S [auth L]MIF4Ge6qcmL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
T [auth LB]MIF4Ge6qcmLB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
U [auth M]MIF4Ge6qcmM1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
V [auth OB]MIF4Ge6qcmOB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
W [auth P]MIF4Ge6qcmP1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
X [auth PB]MIF4Ge6qcmPB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
Y [auth Q]MIF4Ge6qcmQ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
Z [auth SB]MIF4Ge6qcmSB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
C [auth CB]IstB_IS21e6qcmCB01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: IstB_IS21ECOD (v294.2)
D [auth DB]MIF4Ge6qcmDB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
F [auth E]MIF4Ge6qcmE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
H [auth F]MIF4Ge6qcmF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
L [auth GB]MIF4Ge6qcmGB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
O [auth IB]MIF4Ge6qcmIB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
EB [auth AD]e6qcmAD1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
FB [auth CD]IstB_IS21e6qcmCD01 A: beta barrelsX: Ribonuclease H-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: IstB_IS21ECOD (v294.2)
GB [auth FD]MIF4Ge6qcmFD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
HB [auth HD]MIF4Ge6qcmHD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
AB [auth g]e6qcmg1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
BB [auth h]e6qcmh1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
CB [auth i]e6qcmi1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
DB [auth j]e6qcmj1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
KA [auth A]e6qcmA1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
LA [auth B]e6qcmB1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
MA [auth C]e6qcmC1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
NA [auth D]e6qcmD1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
OA [auth I]e6qcmI1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
PA [auth J]e6qcmJ1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
QA [auth N]e6qcmN1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
RA [auth O]e6qcmO1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
SA [auth R]e6qcmR1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
TA [auth S]e6qcmS1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
UA [auth a]e6qcma1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
VA [auth b]e6qcmb1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
WA [auth c]e6qcmc1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
XA [auth d]e6qcmd1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
YA [auth e]e6qcme1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)
ZA [auth f]e6qcmf1 A: beta barrelsX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01740STAS domain (STAS)STAS domainThe STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding ...The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function [2].
Domain
PF01740STAS domain (STAS)STAS domainThe STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding ...The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function [2].
Domain
EB [auth AD]PF01740STAS domain (STAS)STAS domainThe STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding ...The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function [2].
Domain
FB [auth CD],
GB [auth FD],
HB [auth HD]
PF01740STAS domain (STAS)STAS domainThe STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding ...The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function [2].
Domain
PF01740STAS domain (STAS)STAS domainThe STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding ...The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function [2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036513STAS domain superfamilyHomologous Superfamily
IPR014792RsbS co-antagonist protein RsbRA N-terminal domainDomain
IPR002645STAS domainDomain
IPR012292Globin/ProtoglobinHomologous Superfamily
IPR051932Bacterial Stress Response RegulatorsFamily
IPR036513STAS domain superfamilyHomologous Superfamily
IPR014792RsbS co-antagonist protein RsbRA N-terminal domainDomain
IPR002645STAS domainDomain
IPR012292Globin/ProtoglobinHomologous Superfamily
IPR051932Bacterial Stress Response RegulatorsFamily
EB [auth AD]IPR036513STAS domain superfamilyHomologous Superfamily
EB [auth AD]IPR014792RsbS co-antagonist protein RsbRA N-terminal domainDomain
EB [auth AD]IPR002645STAS domainDomain
EB [auth AD]IPR012292Globin/ProtoglobinHomologous Superfamily
EB [auth AD]IPR051932Bacterial Stress Response RegulatorsFamily
FB [auth CD],
GB [auth FD],
HB [auth HD]
IPR036513STAS domain superfamilyHomologous Superfamily
FB [auth CD],
GB [auth FD],
HB [auth HD]
IPR014792RsbS co-antagonist protein RsbRA N-terminal domainDomain
FB [auth CD],
GB [auth FD],
HB [auth HD]
IPR002645STAS domainDomain
FB [auth CD],
GB [auth FD],
HB [auth HD]
IPR012292Globin/ProtoglobinHomologous Superfamily
FB [auth CD],
GB [auth FD],
HB [auth HD]
IPR051932Bacterial Stress Response RegulatorsFamily
IPR036513STAS domain superfamilyHomologous Superfamily
IPR002645STAS domainDomain
IPR051932Bacterial Stress Response RegulatorsFamily