Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF05916e6ptjA1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
AF_UNCLASSIFIEDe6ptjA2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
J [auth 6]PF17207e6ptj62 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
J [auth 6]PF14551e6ptj61 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
J [auth 6]PF17207e6ptj63 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
K [auth 7]PF17207e6ptj71 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
K [auth 7]PF14551e6ptj72 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
L [auth E]PF12341e6ptjE2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 6-bladedF: PF12341ECOD (1.6)
L [auth E]PF20946e6ptjE1 A: alpha superhelicesX: Repetitive alpha hairpinsH: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)T: DNA polymerase alpha-binding protein Ctf4 C-terminal domainF: PF20946ECOD (1.6)
M [auth F]PF12341e6ptjF2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 6-bladedF: PF12341ECOD (1.6)
M [auth F]PF20946e6ptjF1 A: alpha superhelicesX: Repetitive alpha hairpinsH: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)T: DNA polymerase alpha-binding protein Ctf4 C-terminal domainF: PF20946ECOD (1.6)
N [auth G]PF12341e6ptjG2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 6-bladedF: PF12341ECOD (1.6)
N [auth G]PF20946e6ptjG1 A: alpha superhelicesX: Repetitive alpha hairpinsH: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)T: DNA polymerase alpha-binding protein Ctf4 C-terminal domainF: PF20946ECOD (1.6)
BPF05916e6ptjB2 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
BF_UNCLASSIFIEDe6ptjB1 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
CPF05916e6ptjC1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
CPF22466e6ptjC2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)
DPF05916e6ptjD1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
DPF16922e6ptjD2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)
E [auth c]PF02724e6ptjc1 A: alpha arraysX: HhH/H2THH: Cdc45 CID domain (From Topology)T: Cdc45 CID domainF: PF02724ECOD (1.6)
E [auth c]PF02724e6ptjc2 A: a+b three layersX: C-terminal domain in DHH phosphoesterases (From Topology)H: C-terminal domain in DHH phosphoesterases (From Topology)T: C-terminal domain in DHH phosphoesterasesF: PF02724ECOD (1.6)
E [auth c]PF02724e6ptjc3 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: DHH phosphoesterasesF: PF02724ECOD (1.6)
F [auth 2]PF17207e6ptj23 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
F [auth 2]PF14551e6ptj22 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
F [auth 2]F_UNCLASSIFIEDe6ptj21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
G [auth 3]PF17207e6ptj31 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
G [auth 3]PF14551e6ptj33 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
G [auth 3]F_UNCLASSIFIEDe6ptj32 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
H [auth 4]PF17207e6ptj41 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
H [auth 4]PF14551e6ptj43 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
H [auth 4]PF17207e6ptj42 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
I [auth 5]PF17207e6ptj52 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
I [auth 5]PF14551e6ptj51 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
I [auth 5]F_UNCLASSIFIEDe6ptj53 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05916GINS complex protein (Sld5)GINS complex protein- Family
J [auth 6]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
J [auth 6]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
K [auth 7]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
K [auth 7]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
L [auth E],
M [auth F],
N [auth G]
PF12341Minichromosome loss protein, Mcl1, middle region (Mcl1_mid)Minichromosome loss protein, Mcl1, middle region- Repeat
L [auth E],
M [auth F],
N [auth G]
PF20946DNA polymerase alpha-binding protein Ctf4, C-terminal domain (Ctf4_C)DNA polymerase alpha-binding protein Ctf4, C-terminal domainThis domain is found at the C-terminal end of DNA polymerase alpha- binding protein Ctf4 from yeast, its human orthologue AND1, and similar proteins from eukaryotes. This accessory factor for DNA replication plays a role in accurately duplicating the ...This domain is found at the C-terminal end of DNA polymerase alpha- binding protein Ctf4 from yeast, its human orthologue AND1, and similar proteins from eukaryotes. This accessory factor for DNA replication plays a role in accurately duplicating the genome in vivo. This domain folds into a helical extension that is linked to the beta-propeller domain (Pfam:PF12341) and protrudes from one face of the disk-shaped trimer formed by the protein. It is essential for binding of dynamic partner proteins, such as Pol alpha-primase [1-4].
Domain
PF05916GINS complex protein (Sld5)GINS complex protein- Family
PF05916GINS complex protein (Sld5)GINS complex protein- Family
PF05916GINS complex protein (Sld5)GINS complex protein- Family
PF16922DNA replication complex GINS protein SLD5 C-terminus (SLD5_C)DNA replication complex GINS protein SLD5 C-terminusThe C-terminal domain of DNA replication complex GINS protein SLD5 is important in the assembly of the GINS complex, a complex which is involved in initiation of DNA replication and progression of DNA replication forks [1].Domain
E [auth c]PF02724CDC45-like protein (CDC45)CDC45-like protein- Family
F [auth 2]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
F [auth 2]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
G [auth 3]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
G [auth 3]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
H [auth 4]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
H [auth 4]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
I [auth 5]PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA replication complex GINS protein PSF1-
J [auth 6]DNA replication licensing factor MCM6
K [auth 7]DNA replication licensing factor MCM7
L [auth E],
M [auth F],
N [auth G]
DNA polymerase alpha-binding protein
DNA replication complex GINS protein PSF2-
DNA replication complex GINS protein PSF3-
DNA replication complex GINS protein SLD5-
E [auth c]Cell division control protein 45
F [auth 2]DNA replication licensing factor MCM2
G [auth 3]DNA replication licensing factor MCM3
H [auth 4]DNA replication licensing factor MCM4
I [auth 5]Minichromosome maintenance protein 5

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR005339GINS complex, subunit Psf1Family
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
IPR021151GINS subunit, domain ADomain
J [auth 6]IPR008049DNA replication licensing factor Mcm6Family
J [auth 6]IPR041024Mcm6, C-terminal winged-helix domainDomain
J [auth 6]IPR031327Mini-chromosome maintenance proteinFamily
J [auth 6]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
J [auth 6]IPR001208MCM domainDomain
J [auth 6]IPR041562MCM, AAA-lid domainDomain
J [auth 6]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
J [auth 6]IPR027925MCM, N-terminal domainDomain
J [auth 6]IPR033762MCM OB domainDomain
J [auth 6]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth 7]IPR031327Mini-chromosome maintenance proteinFamily
K [auth 7]IPR008050DNA replication licensing factor Mcm7Family
K [auth 7]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
K [auth 7]IPR003593AAA+ ATPase domainDomain
K [auth 7]IPR001208MCM domainDomain
K [auth 7]IPR041562MCM, AAA-lid domainDomain
K [auth 7]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
K [auth 7]IPR027925MCM, N-terminal domainDomain
K [auth 7]IPR033762MCM OB domainDomain
K [auth 7]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth E],
M [auth F],
N [auth G]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
L [auth E],
M [auth F],
N [auth G]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
L [auth E],
M [auth F],
N [auth G]
IPR022100Minichromosome loss protein Mcl1, middle regionDomain
L [auth E],
M [auth F],
N [auth G]
IPR048591DNA polymerase alpha-binding protein Ctf4-like, C-terminal domainDomain
IPR007257DNA replication complex GINS protein Psf2Family
IPR021151GINS subunit, domain ADomain
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
IPR021151GINS subunit, domain ADomain
IPR010492GINS complex, subunit Psf3Family
IPR038437GINS complex, subunit Psf3 superfamilyHomologous Superfamily
IPR008591GINS complex subunit Sld5Family
IPR038749GINS complex protein Sld5, alpha-helical domainDomain
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
IPR021151GINS subunit, domain ADomain
IPR031633DNA replication complex GINS protein SLD5, C-terminalDomain
E [auth c]IPR003874CDC45 familyFamily
F [auth 2]IPR031327Mini-chromosome maintenance proteinFamily
F [auth 2]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
F [auth 2]IPR001208MCM domainDomain
F [auth 2]IPR041562MCM, AAA-lid domainDomain
F [auth 2]IPR008045DNA replication licensing factor Mcm2Family
F [auth 2]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth 2]IPR027925MCM, N-terminal domainDomain
F [auth 2]IPR033762MCM OB domainDomain
F [auth 2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
G [auth 3]IPR031327Mini-chromosome maintenance proteinFamily
G [auth 3]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
G [auth 3]IPR003593AAA+ ATPase domainDomain
G [auth 3]IPR001208MCM domainDomain
G [auth 3]IPR041562MCM, AAA-lid domainDomain
G [auth 3]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
G [auth 3]IPR027925MCM, N-terminal domainDomain
G [auth 3]IPR008046DNA replication licensing factor Mcm3Family
G [auth 3]IPR033762MCM OB domainDomain
G [auth 3]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
H [auth 4]IPR031327Mini-chromosome maintenance proteinFamily
H [auth 4]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
H [auth 4]IPR001208MCM domainDomain
H [auth 4]IPR041562MCM, AAA-lid domainDomain
H [auth 4]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
H [auth 4]IPR027925MCM, N-terminal domainDomain
H [auth 4]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
H [auth 4]IPR008047Mini-chromosome maintenance complex protein 4Family
H [auth 4]IPR033762MCM OB domainDomain
H [auth 4]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
I [auth 5]IPR031327Mini-chromosome maintenance proteinFamily
I [auth 5]IPR018525Mini-chromosome maintenance, conserved siteConserved Site
I [auth 5]IPR001208MCM domainDomain
I [auth 5]IPR041562MCM, AAA-lid domainDomain
I [auth 5]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
I [auth 5]IPR027925MCM, N-terminal domainDomain
I [auth 5]IPR033762MCM OB domainDomain
I [auth 5]IPR008048DNA replication licensing factor Mcm5Family
I [auth 5]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily