6PQK | pdb_00006pqk

Cryogenic crystal structure of barnase A43C/S80C bound to barstar C40A/S59C/A67C/C82A

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B [auth C]	d6pqkc_	Alpha and beta proteins (a+b)	Microbial ribonucleases	Microbial ribonucleases	Bacterial ribonucleases	automated matches	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)
A	d6pqka_	Alpha and beta proteins (a+b)	Microbial ribonucleases	Microbial ribonucleases	Bacterial ribonucleases	automated matches	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)
D	d6pqkd_	Alpha and beta proteins (a/b)	Barstar-like	Barstar-related	Barstar-related	automated matches	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)
C [auth B]	d6pqkb_	Alpha and beta proteins (a/b)	Barstar-like	Barstar-related	Barstar-related	automated matches	(Bacillus amyloliquefaciens ) [TaxId: 1390 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth C]	SCOP2B Superfamily	Microbial ribonucleases	8033554	3001847	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Microbial ribonucleases	8033554	3001847	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Barstar-related	8043969	3000977	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	Barstar-related	8043969	3000977	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth C]	BTB_2	e6pqkC1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: BTB_2	ECOD (v294.1)
A	BTB_2	e6pqkA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: BTB_2	ECOD (v294.1)
D	BTB_2	e6pqkD1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: BTB_2	ECOD (v294.1)
C [auth B]	BTB_2	e6pqkB1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: BTB_2	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth C]	3.10.450.30	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (utative)
A	3.10.450.30	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (utative)
D	3.30.370.10	Alpha Beta	2-Layer Sandwich	Barnase	Chain D	CATH (utative)
C [auth B]	3.30.370.10	Alpha Beta	2-Layer Sandwich	Barnase	Chain D	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C]	Ribonuclease	endonuclease activity nuclease activity catalytic activity, acting on RNA RNA endonuclease activity catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity hydrolase activity RNA binding binding nucleic acid binding	-	cellular anatomical structure extracellular region
C [auth B], D	Barstar	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C]	IPR000026	Guanine-specific ribonuclease N1-like	Family
A, B [auth C]	IPR053753	Ribonuclease N1/T1-like	Homologous Superfamily
A, B [auth C]	IPR001887	Barnase	Family
A, B [auth C]	IPR016191	Ribonuclease/ribotoxin	Homologous Superfamily
C [auth B], D	IPR000468	Barstar (barnase inhibitor)	Domain
C [auth B], D	IPR035905	Barstar-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.