Crystal Structure of Antibody P-p1f1 in Complex with eOD-GT8
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth A] | ATP-synt | e6p8nA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (v294.1) |
| A [auth C] | ATP-synt | e6p8nC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (v294.1) |
| C [auth L] | ATP-synt | e6p8nL1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (v294.1) |
| F [auth D] | ATP-synt | e6p8nD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (v294.1) |
| B [auth H] | ATP-synt | e6p8nH1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (v294.1) |
| E [auth B] | ATP-synt | e6p8nB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: DUF1107-like | T: DUF1107-like | F: ATP-synt | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| F [auth D] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| B [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| E [auth B] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| C [auth L], F [auth D] | Fab P-p1f1, anti-gp120 CD4-binding site (CD4bs) [HIV-1], broadly | L-KAPPA | Homo sapiens (human) | IGKV8-30*01, IGKJ1*01, IGKJ2*01, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202615-0) |
| B [auth H], E [auth B] | Fab P-p1f1, anti-gp120 CD4-binding site (CD4bs) [HIV-1], broadly | VH-CH1 | Homo sapiens (human) | IGHV1-2*02, IGHJ1*01, IGHG1*03, IGHG1*08, IGHG1*06 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202615-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| C [auth L], F [auth D] | Light Chain | IGKV8 | Kappa | env outer domain eod-gt8 | SAbDab (2026-04-24) |
| B [auth H], E [auth B] | Heavy Chain | IGHV1 | - | env outer domain eod-gt8 | SAbDab (2026-04-24) |
