Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like8040254 3001272 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like8040254 3001272 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRibonuclease H-like8040253 3000143 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like8040254 3001272 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRibonuclease H-like8040253 3000143 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like8040254 3001272 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibonuclease H-like8040253 3000143 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like8040254 3001272 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like8040254 3001272 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like8040254 3001272 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like8040254 3001272 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRibonuclease H-like8040253 3000143 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyThioredoxin-like8044359 3000031 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyThioredoxin-like8044359 3000031 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyThioredoxin-like8044359 3000031 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyThioredoxin-like8044359 3000031 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADNA_pol_A_2nde6p7eA2 A: alpha arraysX: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)T: helical bundle in Bacillus stearothermophilus-like DNA polymerase IF: DNA_pol_A_2ndECOD (1.6)
ADNA_pol_A_1ste6p7eA1 A: alpha bundlesX: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)T: fingers domain in bacteriophage RB69-like DNA polymerase IF: DNA_pol_A_1stECOD (1.6)
ADNA_pol_A_3rde6p7eA4 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: DNA_pol_A_3rdECOD (1.6)
ARNase_H_2e6p7eA3 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: RNase_H_2ECOD (1.6)
BDNA_pol_A_2nde6p7eB2 A: alpha arraysX: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)T: helical bundle in Bacillus stearothermophilus-like DNA polymerase IF: DNA_pol_A_2ndECOD (1.6)
BDNA_pol_A_1ste6p7eB1 A: alpha bundlesX: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)T: fingers domain in bacteriophage RB69-like DNA polymerase IF: DNA_pol_A_1stECOD (1.6)
BDNA_pol_A_3rde6p7eB4 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: DNA_pol_A_3rdECOD (1.6)
BRNase_H_2e6p7eB3 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: RNase_H_2ECOD (1.6)
CDNA_pol_A_2nde6p7eC2 A: alpha arraysX: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)T: helical bundle in Bacillus stearothermophilus-like DNA polymerase IF: DNA_pol_A_2ndECOD (1.6)
CDNA_pol_A_1ste6p7eC4 A: alpha bundlesX: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)T: fingers domain in bacteriophage RB69-like DNA polymerase IF: DNA_pol_A_1stECOD (1.6)
CDNA_pol_A_3rde6p7eC1 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: DNA_pol_A_3rdECOD (1.6)
CRNase_H_2e6p7eC3 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: RNase_H_2ECOD (1.6)
DDNA_pol_A_2nde6p7eD4 A: alpha arraysX: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)T: helical bundle in Bacillus stearothermophilus-like DNA polymerase IF: DNA_pol_A_2ndECOD (1.6)
DDNA_pol_A_1ste6p7eD3 A: alpha bundlesX: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)T: fingers domain in bacteriophage RB69-like DNA polymerase IF: DNA_pol_A_1stECOD (1.6)
DDNA_pol_A_3rde6p7eD1 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: DNA_pol_A_3rdECOD (1.6)
DRNase_H_2e6p7eD2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: RNase_H_2ECOD (1.6)
EThioredoxine6p7eE1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: ThioredoxinECOD (1.6)
FThioredoxine6p7eF1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: ThioredoxinECOD (1.6)
GThioredoxine6p7eG1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: ThioredoxinECOD (1.6)
HThioredoxine6p7eH1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: ThioredoxinECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00476DNA polymerase family A (DNA_pol_A)DNA polymerase family A- Family
E, F, G, H
PF00085Thioredoxin (Thioredoxin)ThioredoxinThioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
DNA-directed DNA polymerase -
E, F, G, H
TrxA
I, K, M, O
DNA (5'-D(P*GP*GP*CP*AP*GP*GP*TP*GP*GP*TP*CP*TP*TP*GP*CP*CP*GP*GP*TP*GP*A)-3')---
J, L, N, P
DNA (25-MER)---
Q [auth U],
R [auth V]
ASP-THR-ASP-PHE peptide---
S [auth W]THR-ASP-PHE peptide---