6OP5 | pdb_00006op5

Crystal Structure of Piper methysticum Styrylpyrone Synthase 1 in complex with p-coumaroyl-CoA

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d6op5c1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	(Piper methysticum ) [TaxId: 130404 ],	SCOPe (2.08)
A	d6op5a1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	(Piper methysticum ) [TaxId: 130404 ],	SCOPe (2.08)
D	d6op5d1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	(Piper methysticum ) [TaxId: 130404 ],	SCOPe (2.08)
E	d6op5e1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	(Piper methysticum ) [TaxId: 130404 ],	SCOPe (2.08)
F	d6op5f1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	(Piper methysticum ) [TaxId: 130404 ],	SCOPe (2.08)
B	d6op5b1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	(Piper methysticum ) [TaxId: 130404 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Thiolase-like	8101259	3000122	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Thiolase-like	8101785	3000122	SCOP2B (2022-06-29)
A	SCOP2 Family	Chalcone synthase-like	8101258	4000864	SCOP2 (2022-06-29)
A	SCOP2 Family	Chalcone synthase-like	8101784	4000864	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Thiolase-like	8101259	3000122	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Thiolase-like	8101785	3000122	SCOP2 (2022-06-29)
D	SCOP2B Superfamily	Thiolase-like	8101259	3000122	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Thiolase-like	8101785	3000122	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Thiolase-like	8101785	3000122	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Thiolase-like	8101259	3000122	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Thiolase-like	8101259	3000122	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Thiolase-like	8101785	3000122	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Thiolase-like	8101785	3000122	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Thiolase-like	8101259	3000122	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	e6op5C1	A: alpha bundles	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	ECOD (develop294)
A	ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	e6op5A1	A: alpha bundles	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	ECOD (develop294)
D	ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	e6op5D1	A: alpha bundles	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	ECOD (develop294)
E	ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	e6op5E1	A: alpha bundles	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	ECOD (develop294)
F	ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	e6op5F1	A: alpha bundles	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	ECOD (develop294)
B	ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	e6op5B1	A: alpha bundles	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (utative)
A	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (utative)
D	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (utative)
E	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (utative)
F	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (utative)
B	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C	Styrylpyrone synthase 1	acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity	polyketide biosynthetic process secondary metabolite biosynthetic process biosynthetic process polyketide metabolic process metabolic process cellular process secondary metabolic process	-
A, B, D, E, F	Styrylpyrone synthase 1	acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity	polyketide biosynthetic process secondary metabolite biosynthetic process biosynthetic process polyketide metabolic process metabolic process cellular process secondary metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C	IPR001099	Chalcone/stilbene synthase, N-terminal	Domain
C	IPR016039	Thiolase-like	Homologous Superfamily
C	IPR012328	Chalcone/stilbene synthase, C-terminal	Domain
C	IPR011141	Polyketide synthase, type III	Family
A, B, D, E, F	IPR001099	Chalcone/stilbene synthase, N-terminal	Domain
A, B, D, E, F	IPR016039	Thiolase-like	Homologous Superfamily
A, B, D, E, F	IPR012328	Chalcone/stilbene synthase, C-terminal	Domain
A, B, D, E, F	IPR011141	Polyketide synthase, type III	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.