6ODY | pdb_00006ody

Cryo-EM structure of Helicobacter pylori VacA hexamer


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASel1e6odyA01 A: a/b three-layered sandwichesX: Rossmann-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sel1ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Vacuolating cytotoxin autotransporter -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR006315Outer membrane autotransporter barrel domainDomain
A, B, C, D, E
IPR003842Vacuolating cytotoxin, beta-helical domainDomain
A, B, C, D, E
IPR036709Autotransporter beta-domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR005546Autotransporter beta-domainDomain