6NCX
Crystal structure of GH2 beta-galacturonidase from Eisenbergiella tayi bound to galacturonate
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | PF22666 | e6ncxD3 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF22666 | ECOD (1.6) |
A [auth D] | PF00703 | e6ncxD2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00703 | ECOD (1.6) |
A [auth D] | PF02836 | e6ncxD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF02836 | ECOD (1.6) |
B [auth A] | PF22666 | e6ncxA2 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF22666 | ECOD (1.6) |
B [auth A] | PF00703 | e6ncxA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00703 | ECOD (1.6) |
B [auth A] | PF02836 | e6ncxA3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF02836 | ECOD (1.6) |
C [auth B] | PF22666 | e6ncxB2 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF22666 | ECOD (1.6) |
C [auth B] | PF00703 | e6ncxB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00703 | ECOD (1.6) |
C [auth B] | PF02836 | e6ncxB3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF02836 | ECOD (1.6) |
D [auth C] | PF22666 | e6ncxC3 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF22666 | ECOD (1.6) |
D [auth C] | PF00703 | e6ncxC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00703 | ECOD (1.6) |
D [auth C] | PF02836 | e6ncxC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF02836 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D], B [auth A], C [auth B], D [auth C] | PF02836 | Glycosyl hydrolases family 2, TIM barrel domain (Glyco_hydro_2_C) | Glycosyl hydrolases family 2, TIM barrel domain | This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth D], B [auth A], C [auth B], D [auth C] | Beta-galacturonidase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D], B [auth A], C [auth B], D [auth C] | IPR036156 | Beta-Galactosidase/glucuronidase domain superfamily | Homologous Superfamily |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR006103 | Glycoside hydrolase family 2, catalytic domain | Domain |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR006101 | Glycoside hydrolase, family 2 | Family |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily |