6N9T
Structure of a peptide-based photo-affinity cross-linker with Herceptin Fc
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF07654 | e6n9tA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
C [auth B] | PF07654 | e6n9tB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth B] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A, C [auth B] | IgG1 Fc fragment | FUSION-TNFRSF1B-GAMMA-1 | Homo sapiens (human) | IGHG1*01, IGHG1*02, IGHG1*03, IGHG1*04, IGHG1*05, IGHG1*12, IGHG1*14, IGHG1*08, IGHG1*09, IGHG1*10, IGHG1*07, IGHG1*06 | C-DOMAIN CH2, C-DOMAIN CH3 | IG | CH2-CH3 | IMGT (202416-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, C [auth B] | Immunoglobulin G1 FC | - | - | |
B [auth E], D [auth F] | Photo-affinity peptide | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B] | IPR003597 | Immunoglobulin C1-set | Domain |
A, C [auth B] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A, C [auth B] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
A, C [auth B] | IPR003599 | Immunoglobulin subtype | Domain |
A, C [auth B] | IPR013106 | Immunoglobulin V-set domain | Domain |
A, C [auth B] | IPR007110 | Immunoglobulin-like domain | Domain |
A, C [auth B] | IPR003006 | Immunoglobulin/major histocompatibility complex, conserved site | Conserved Site |