6N0F | pdb_00006n0f

Cryo-EM structure of the HO BMC shell: subregion classified for BMC-T: TD-TSTSTS


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BA [auth JD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
EA [auth KA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
FA [auth KB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
GA [auth KC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
H [auth GB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
I [auth GC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
IA [auth KE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
JA [auth KF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
K [auth GE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
KA [auth LA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
L [auth GF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
MA [auth LC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
N [auth HB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
OA [auth LE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
P [auth HD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
Q [auth HE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
S [auth IA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
T [auth IB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
W [auth IE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
Y [auth JA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
Z [auth JB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
X [auth IF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
V [auth ID]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
U [auth IC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
R [auth HF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
PA [auth LF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
O [auth HC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
NA [auth LD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
M [auth HA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
LA [auth LB]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
J [auth GD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
HA [auth KD]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
G [auth GA]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
DA [auth JF]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
CA [auth JE]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)
AA [auth JC]SCOP2B SuperfamilyCcmK-like 8081332 3001326 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
SA [auth I]Tfb4e6n0fI1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
WA [auth S]Tfb4e6n0fS1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
XA [auth T]Tfb4e6n0fT1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
YA [auth U]Tfb4e6n0fU1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
VA [auth O]Tfb4e6n0fO1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
UA [auth N]Tfb4e6n0fN1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
TA [auth M]Tfb4e6n0fM1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
RA [auth H]Tfb4e6n0fH1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
QA [auth G]Tfb4e6n0fG1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
BA [auth JD]Tfb4e6n0fJD1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
EA [auth KA]Tfb4e6n0fKA1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
FA [auth KB]Tfb4e6n0fKB1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
GA [auth KC]Tfb4e6n0fKC1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
H [auth GB]Tfb4e6n0fGB1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
I [auth GC]Tfb4e6n0fGC1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
IA [auth KE]Tfb4e6n0fKE1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
JA [auth KF]Tfb4e6n0fKF1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
K [auth GE]Tfb4e6n0fGE1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
KA [auth LA]Tfb4e6n0fLA1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
L [auth GF]Tfb4e6n0fGF1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
MA [auth LC]Tfb4e6n0fLC1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
N [auth HB]Tfb4e6n0fHB1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
OA [auth LE]Tfb4e6n0fLE1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
P [auth HD]Tfb4e6n0fHD1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
Q [auth HE]Tfb4e6n0fHE1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
S [auth IA]Tfb4e6n0fIA1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
T [auth IB]Tfb4e6n0fIB1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
W [auth IE]Tfb4e6n0fIE1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
Y [auth JA]Tfb4e6n0fJA1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
Z [auth JB]Tfb4e6n0fJB1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
X [auth IF]Tfb4e6n0fIF1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
V [auth ID]Tfb4e6n0fID1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
U [auth IC]Tfb4e6n0fIC1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
R [auth HF]Tfb4e6n0fHF1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
PA [auth LF]Tfb4e6n0fLF1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
O [auth HC]Tfb4e6n0fHC1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
NA [auth LD]Tfb4e6n0fLD1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
M [auth HA]Tfb4e6n0fHA1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
LA [auth LB]Tfb4e6n0fLB1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
J [auth GD]Tfb4e6n0fGD1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
HA [auth KD]Tfb4e6n0fKD1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
G [auth GA]Tfb4e6n0fGA1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
DA [auth JF]Tfb4e6n0fJF1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
CA [auth JE]Tfb4e6n0fJE1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
AA [auth JC]Tfb4e6n0fJC1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
ATfb4e6n0fA1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
BTfb4e6n0fB1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
CTfb4e6n0fC1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
FTfb4e6n0fF1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
ETfb4e6n0fE1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)
DTfb4e6n0fD1 A: alpha bundlesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: Tfb4ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain
A, B, C, D, E
PF00936BMC domain (BMC)BMC domainBacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR011238Bacterial microcompartment shell protein PduTFamily
IPR000249Bacterial microcompartment domainDomain
IPR050575Bacterial microcompartment shellFamily
IPR044872CcmK/CsoS1, bacterial microcompartment domainDomain
IPR037233CcmK-like superfamilyHomologous Superfamily
IPR020808Bacterial microcompartments protein, conserved siteConserved Site
IPR000249Bacterial microcompartment domainDomain
IPR050575Bacterial microcompartment shellFamily
IPR044872CcmK/CsoS1, bacterial microcompartment domainDomain
IPR037233CcmK-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR000249Bacterial microcompartment domainDomain
A, B, C, D, E
IPR044870Bacterial microcompartment (BMC) circularly permuted domainDomain
A, B, C, D, E
IPR037233CcmK-like superfamilyHomologous Superfamily