6N06 | pdb_00006n06

Cryo-EM structure of the HO BMC shell: BMC-T1 in the assembled shell

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
AA [auth JF]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
BA [auth KA]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
D [auth GA]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
DA [auth KC]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
E [auth GB]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
EA [auth KD]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
F [auth GC]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
FA [auth KE]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
G [auth GD]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
GA [auth KF]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
H [auth GE]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
HA [auth LA]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
I [auth GF]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
IA [auth LB]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
J [auth HA]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
JA [auth LC]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
K [auth HB]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
KA [auth LD]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
L [auth HC]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
LA [auth LE]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
M [auth HD]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
MA [auth LF]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
N [auth HE]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
O [auth HF]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
P [auth IA]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
R [auth IC]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
S [auth ID]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
T [auth IE]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
U [auth IF]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
V [auth JA]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
W [auth JB]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
X [auth JC]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
Y [auth JD]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
Z [auth JE]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
Q [auth IB]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)
CA [auth KB]	SCOP2B Superfamily	CcmK-like	8081332	3001326	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
AA [auth JF]	Tfb4	e6n06JF1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
BA [auth KA]	Tfb4	e6n06KA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
D [auth GA]	Tfb4	e6n06GA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
DA [auth KC]	Tfb4	e6n06KC1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
E [auth GB]	Tfb4	e6n06GB1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
EA [auth KD]	Tfb4	e6n06KD1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
F [auth GC]	Tfb4	e6n06GC1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
FA [auth KE]	Tfb4	e6n06KE1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
G [auth GD]	Tfb4	e6n06GD1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
GA [auth KF]	Tfb4	e6n06KF1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
H [auth GE]	Tfb4	e6n06GE1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
HA [auth LA]	Tfb4	e6n06LA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
I [auth GF]	Tfb4	e6n06GF1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
IA [auth LB]	Tfb4	e6n06LB1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
J [auth HA]	Tfb4	e6n06HA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
JA [auth LC]	Tfb4	e6n06LC1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
K [auth HB]	Tfb4	e6n06HB1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
KA [auth LD]	Tfb4	e6n06LD1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
L [auth HC]	Tfb4	e6n06HC1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
LA [auth LE]	Tfb4	e6n06LE1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
M [auth HD]	Tfb4	e6n06HD1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
MA [auth LF]	Tfb4	e6n06LF1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
N [auth HE]	Tfb4	e6n06HE1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
O [auth HF]	Tfb4	e6n06HF1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
P [auth IA]	Tfb4	e6n06IA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
R [auth IC]	Tfb4	e6n06IC1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
S [auth ID]	Tfb4	e6n06ID1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
T [auth IE]	Tfb4	e6n06IE1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
U [auth IF]	Tfb4	e6n06IF1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
V [auth JA]	Tfb4	e6n06JA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
W [auth JB]	Tfb4	e6n06JB1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
X [auth JC]	Tfb4	e6n06JC1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
Y [auth JD]	Tfb4	e6n06JD1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
Z [auth JE]	Tfb4	e6n06JE1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
Q [auth IB]	Tfb4	e6n06IB1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
CA [auth KB]	Tfb4	e6n06KB1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
B	Tfb4	e6n06B1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
C	Tfb4	e6n06C1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)
A	Tfb4	e6n06A1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], E [auth GB], EA [auth KD], F [auth GC], FA [auth KE], G [auth GD], GA [auth KF], H [auth GE], HA [auth LA], I [auth GF], IA [auth LB], J [auth HA], JA [auth LC], K [auth HB], KA [auth LD], L [auth HC], LA [auth LE], M [auth HD], MA [auth LF], N [auth HE], O [auth HF], P [auth IA], Q [auth IB], R [auth IC], S [auth ID], T [auth IE], U [auth IF], V [auth JA], W [auth JB], X [auth JC], Y [auth JD], Z [auth JE]	PF00936	BMC domain (BMC)	BMC domain	Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...	Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].	Domain
A, B, C	PF00936	BMC domain (BMC)	BMC domain	Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ...	Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric structure [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], E [auth GB], EA [auth KD], F [auth GC], FA [auth KE], G [auth GD], GA [auth KF], H [auth GE], HA [auth LA], I [auth GF], IA [auth LB], J [auth HA], JA [auth LC], K [auth HB], KA [auth LD], L [auth HC], LA [auth LE], M [auth HD], MA [auth LF], N [auth HE], O [auth HF], P [auth IA], Q [auth IB], R [auth IC], S [auth ID], T [auth IE], U [auth IF], V [auth JA], W [auth JB], X [auth JC], Y [auth JD], Z [auth JE]	Microcompartments protein	-	-	intracellular organelle bacterial microcompartment cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle
A, B, C	Microcompartments protein	-	-	intracellular organelle bacterial microcompartment cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], E [auth GB], EA [auth KD], F [auth GC], FA [auth KE], G [auth GD], GA [auth KF], H [auth GE], HA [auth LA], I [auth GF], IA [auth LB], J [auth HA], JA [auth LC], K [auth HB], KA [auth LD], L [auth HC], LA [auth LE], M [auth HD], MA [auth LF], N [auth HE], O [auth HF], P [auth IA], Q [auth IB], R [auth IC], S [auth ID], T [auth IE], U [auth IF], V [auth JA], W [auth JB], X [auth JC], Y [auth JD], Z [auth JE]	IPR020808	Bacterial microcompartments protein, conserved site	Conserved Site
AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], E [auth GB], EA [auth KD], F [auth GC], FA [auth KE], G [auth GD], GA [auth KF], H [auth GE], HA [auth LA], I [auth GF], IA [auth LB], J [auth HA], JA [auth LC], K [auth HB], KA [auth LD], L [auth HC], LA [auth LE], M [auth HD], MA [auth LF], N [auth HE], O [auth HF], P [auth IA], Q [auth IB], R [auth IC], S [auth ID], T [auth IE], U [auth IF], V [auth JA], W [auth JB], X [auth JC], Y [auth JD], Z [auth JE]	IPR000249	Bacterial microcompartment domain	Domain
AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], E [auth GB], EA [auth KD], F [auth GC], FA [auth KE], G [auth GD], GA [auth KF], H [auth GE], HA [auth LA], I [auth GF], IA [auth LB], J [auth HA], JA [auth LC], K [auth HB], KA [auth LD], L [auth HC], LA [auth LE], M [auth HD], MA [auth LF], N [auth HE], O [auth HF], P [auth IA], Q [auth IB], R [auth IC], S [auth ID], T [auth IE], U [auth IF], V [auth JA], W [auth JB], X [auth JC], Y [auth JD], Z [auth JE]	IPR050575	Bacterial microcompartment shell	Family
AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], E [auth GB], EA [auth KD], F [auth GC], FA [auth KE], G [auth GD], GA [auth KF], H [auth GE], HA [auth LA], I [auth GF], IA [auth LB], J [auth HA], JA [auth LC], K [auth HB], KA [auth LD], L [auth HC], LA [auth LE], M [auth HD], MA [auth LF], N [auth HE], O [auth HF], P [auth IA], Q [auth IB], R [auth IC], S [auth ID], T [auth IE], U [auth IF], V [auth JA], W [auth JB], X [auth JC], Y [auth JD], Z [auth JE]	IPR044872	CcmK/CsoS1, bacterial microcompartment domain	Domain
AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], AA [auth JF], BA [auth KA], CA [auth KB], D [auth GA], DA [auth KC], E [auth GB], EA [auth KD], F [auth GC], FA [auth KE], G [auth GD], GA [auth KF], H [auth GE], HA [auth LA], I [auth GF], IA [auth LB], J [auth HA], JA [auth LC], K [auth HB], KA [auth LD], L [auth HC], LA [auth LE], M [auth HD], MA [auth LF], N [auth HE], O [auth HF], P [auth IA], Q [auth IB], R [auth IC], S [auth ID], T [auth IE], U [auth IF], V [auth JA], W [auth JB], X [auth JC], Y [auth JD], Z [auth JE]	IPR037233	CcmK-like superfamily	Homologous Superfamily
A, B, C	IPR011238	Bacterial microcompartment shell protein PduT	Family
A, B, C	IPR000249	Bacterial microcompartment domain	Domain
A, B, C	IPR050575	Bacterial microcompartment shell	Family
A, B, C	IPR044872	CcmK/CsoS1, bacterial microcompartment domain	Domain
A, B, C	IPR037233	CcmK-like superfamily	Homologous Superfamily