6MJN | pdb_00006mjn

Crystal structure of an organic hydroperoxide resistance protein OsmC, predicted redox protein, regulator of sulfide bond formation from Legionella pneumophila

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d6mjnd1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	automated matches	automated matches	(Legionella pneumophila ) [TaxId: 446 ],	SCOPe (2.08)
D	d6mjnd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Legionella pneumophila ) [TaxId: 446 ],	SCOPe (2.08)
C	d6mjnc_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	automated matches	automated matches	(Legionella pneumophila ) [TaxId: 446 ],	SCOPe (2.08)
B	d6mjnb1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	automated matches	automated matches	(Legionella pneumophila ) [TaxId: 446 ],	SCOPe (2.08)
B	d6mjnb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Legionella pneumophila ) [TaxId: 446 ],	SCOPe (2.08)
A	d6mjna_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	automated matches	automated matches	(Legionella pneumophila ) [TaxId: 446 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	OsmC-like	8076341	3000621	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	OsmC-like	8076341	3000621	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	OsmC-like	8076341	3000621	SCOP2B (2022-06-29)
A	SCOP2 Family	Ohr/OsmC resistance proteins	8076340	4003336	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	OsmC-like	8076341	3000621	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	OsmC	e6mjnD1	A: a+b two layers	X: OsmC-like (From Homology)	H: OsmC-like	T: OsmC-like	F: OsmC	ECOD (1.6)
C	OsmC	e6mjnC1	A: a+b two layers	X: OsmC-like (From Homology)	H: OsmC-like	T: OsmC-like	F: OsmC	ECOD (1.6)
B	OsmC	e6mjnB1	A: a+b two layers	X: OsmC-like (From Homology)	H: OsmC-like	T: OsmC-like	F: OsmC	ECOD (1.6)
A	OsmC	e6mjnA1	A: a+b two layers	X: OsmC-like (From Homology)	H: OsmC-like	T: OsmC-like	F: OsmC	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
D	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
C	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
C	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
B	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
B	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
A	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
A	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF02566	OsmC-like protein (OsmC)	OsmC-like protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Organic hydroperoxide resistance protein	-	response to oxidative stress response to stimulus response to stress	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
A, B, C, D	IPR036102	OsmC/Ohr superfamily	Homologous Superfamily
A, B, C, D	IPR019953	Organic hydroperoxide resistance protein famiy	Family
A, B, C, D	IPR003718	OsmC/Ohr family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.