6LY9
The membrane-embedded Vo domain of V/A-ATPase from Thermus thermophilus
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
N [auth M] | SCOP2B Superfamily | V-type ATP synthase subunit C | 8040383 | 3000323 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth R] | PF00137 | e6ly9R1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
F [auth S] | PF00137 | e6ly9S1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
B [auth O] | PF00137 | e6ly9O1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
C [auth P] | PF00137 | e6ly9P1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
D [auth Q] | PF00137 | e6ly9Q1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
G [auth T] | PF00137 | e6ly9T1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
H [auth U] | PF00137 | e6ly9U1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
I [auth V] | PF00137 | e6ly9V1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
J [auth W] | PF00137 | e6ly9W1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
K [auth X] | PF00137 | e6ly9X1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
L [auth Y] | PF00137 | e6ly9Y1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
M [auth Z] | PF00137 | e6ly9Z1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
N [auth M] | PF01992 | e6ly9M3 | A: alpha bundles | X: V-type ATP synthase subunit C | H: V-type ATP synthase subunit C (From Topology) | T: V-type ATP synthase subunit C | F: PF01992 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth N] | PF18670 | V-type ATPase subunit I, N-terminal domain (V_ATPase_I_N) | V-type ATPase subunit I, N-terminal domain | Vacuolar H+-ATPase (V-ATPase) is a ubiquitous multi-subunit proton pump that acidifies a wide variety of intracellular compartments, which in turn affects many biological processes, including membrane trafficking, protein degradation and coupled tran ... | Domain |
A [auth N] | PF18274 | Vacuolar ATPase Subunit I N-terminal proximal lobe (V_ATPase_prox) | Vacuolar ATPase Subunit I N-terminal proximal lobe | This domain is found in the cytoplasmic N-terminal domain of vacuolar ATP synthase subunit I present in Meiothermus ruber. Subunit I is a homolog of subunit A which associates with the membrane-bound complex of eukaryotic vacuolar H+-ATPase (V-ATPase ... | Domain |
A [auth N] | PF01496 | V-type ATPase 116kDa subunit family (V_ATPase_I) | V-type ATPase 116kDa subunit family | - | Family |
PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | - | Family | |
N [auth M] | PF01992 | ATP synthase (C/AC39) subunit (vATP-synt_AC39) | ATP synthase (C/AC39) subunit | - | Family |
O [auth K] | PF16999 | Vacuolar (H+)-ATPase G subunit (V-ATPase_G_2) | Vacuolar (H+)-ATPase G subunit | - | Coiled-coil |
P [auth L] | PF01991 | ATP synthase (E/31 kDa) subunit (vATP-synt_E) | ATP synthase (E/31 kDa) subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth N] | IPR040574 | V-type ATP synthase subunit I, N-terminal | Domain |
A [auth N] | IPR002490 | V-type ATPase, V0 complex, 116kDa subunit family | Family |
A [auth N] | IPR041276 | Vacuolar ATPase subunit I, N-terminal proximal lobe | Domain |
IPR035921 | F/V-ATP synthase subunit C superfamily | Homologous Superfamily | |
IPR000245 | V-ATPase proteolipid subunit | Family | |
IPR002379 | V-ATPase proteolipid subunit C-like domain | Domain | |
N [auth M] | IPR036079 | V-type ATP synthase subunit c/d subunit superfamily | Homologous Superfamily |
N [auth M] | IPR035067 | V-type ATPase subunit C/d | Homologous Superfamily |
N [auth M] | IPR002843 | ATPase, V0 complex, c/d subunit | Family |
N [auth M] | IPR044911 | V-type ATP synthase c/d subunit, domain 3 superfamily | Homologous Superfamily |
N [auth M] | IPR014272 | ATPase, V0 complex, c subunit | Family |
P [auth L] | IPR002842 | V-type ATPase subunit E | Family |
P [auth L] | IPR038495 | V-type ATPase subunit E, C-terminal domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Proton or Sodium translocating F-type, V-type and A-type ATPases | V-type and F-type ATPases |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |