Annotations: 6LQH

High resolution architecture of curli complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
I	SCOP2B Superfamily	TolB N-terminal domain-like	8053476	3000482	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	TolB N-terminal domain-like	8053476	3000482	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	TolB N-terminal domain-like	8053476	3000482	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	TolB N-terminal domain-like	8053476	3000482	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	TolB N-terminal domain-like	8053476	3000482	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	TolB N-terminal domain-like	8053476	3000482	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	TolB N-terminal domain-like	8053476	3000482	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	TolB N-terminal domain-like	8053476	3000482	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	TolB N-terminal domain-like	8053476	3000482	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I	Gp5_trimer_C	e6lqhI1	A: alpha arrays	X: Tail specific protease helical domain	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Gp5_trimer_C	ECOD (v295)
H	Gp5_trimer_C	e6lqhH1	A: alpha arrays	X: Tail specific protease helical domain	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Gp5_trimer_C	ECOD (v295)
G	Gp5_trimer_C	e6lqhG1	A: alpha arrays	X: Tail specific protease helical domain	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Gp5_trimer_C	ECOD (v295)
F	Gp5_trimer_C	e6lqhF1	A: alpha arrays	X: Tail specific protease helical domain	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Gp5_trimer_C	ECOD (v295)
E	Gp5_trimer_C	e6lqhE1	A: alpha arrays	X: Tail specific protease helical domain	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Gp5_trimer_C	ECOD (v295)
D	Gp5_trimer_C	e6lqhD1	A: alpha arrays	X: Tail specific protease helical domain	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Gp5_trimer_C	ECOD (v295)
C	Gp5_trimer_C	e6lqhC1	A: alpha arrays	X: Tail specific protease helical domain	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Gp5_trimer_C	ECOD (v295)
B	Gp5_trimer_C	e6lqhB1	A: alpha arrays	X: Tail specific protease helical domain	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Gp5_trimer_C	ECOD (v295)
A	Gp5_trimer_C	e6lqhA1	A: alpha arrays	X: Tail specific protease helical domain	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Gp5_trimer_C	ECOD (v295)
R [auth i]	AAA	e6lqhi1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
Q [auth h]	AAA	e6lqhh1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
P [auth g]	AAA	e6lqhg1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
O [auth f]	AAA	e6lqhf1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
N [auth e]	AAA	e6lqhe1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
M [auth d]	AAA	e6lqhd1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
L [auth c]	AAA	e6lqhc1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
K [auth b]	AAA	e6lqhb1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA	ECOD (v295)
J [auth a]	PHD	e6lqha01	A: alpha arrays	X: Ribonuclease H-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PHD	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I	Curli production assembly/transport component CsgG	identical protein binding protein binding binding	cellular component biogenesis cellular component organization cellular component assembly cell projection organization cellular process pilus assembly cellular component organization or biogenesis pilus organization curli assembly cell projection assembly transmembrane transport localization establishment of protein localization protein transmembrane transport cellular component biogenesis cellular component organization cellular component assembly cell projection organization cellular process pilus assembly cellular component organization or biogenesis pilus organization curli assembly cell projection assembly transmembrane transport localization establishment of protein localization protein transmembrane transport transport protein transport macromolecule localization intracellular protein localization establishment of localization cell aggregation biofilm formation biological process involved in intraspecies interaction between organisms single-species biofilm formation aggregation of unicellular organisms protein transport across the cell outer membrane protein secretion by the type VIII secretion system	curli secretion complex protein-containing complex extracellular region membrane membrane protein complex transporter complex cell outer membrane cellular anatomical structure external encapsulating structure transmembrane transporter complex cell envelope extracellular protein-containing complex outer membrane cell periphery curli secretion complex protein-containing complex extracellular region membrane membrane protein complex transporter complex cell outer membrane cellular anatomical structure external encapsulating structure transmembrane transporter complex cell envelope extracellular protein-containing complex outer membrane cell periphery plasma membrane outer membrane-bounded periplasmic space periplasmic space
J [auth a], K [auth b], L [auth c], M [auth d], N [auth e], J [auth a], K [auth b], L [auth c], M [auth d], N [auth e], O [auth f], P [auth g], Q [auth h], R [auth i]	Curli production assembly/transport component CsgF	identical protein binding protein binding binding	cellular component biogenesis cellular component organization cellular component assembly cell projection organization cellular process pilus assembly cellular component organization or biogenesis pilus organization curli assembly cell projection assembly protein transport across the cell outer membrane establishment of protein localization transport establishment of localization cellular component biogenesis cellular component organization cellular component assembly cell projection organization cellular process pilus assembly cellular component organization or biogenesis pilus organization curli assembly cell projection assembly protein transport across the cell outer membrane establishment of protein localization transport establishment of localization transmembrane transport localization protein secretion by the type VIII secretion system protein transmembrane transport protein transport macromolecule localization intracellular protein localization	curli secretion complex protein-containing complex extracellular region membrane membrane protein complex transporter complex cell outer membrane cellular anatomical structure external encapsulating structure transmembrane transporter complex cell envelope extracellular protein-containing complex outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR005534	Curli production assembly/transport component CsgG	Family
J [auth a], K [auth b], L [auth c], M [auth d], N [auth e], J [auth a], K [auth b], L [auth c], M [auth d], N [auth e], O [auth f], P [auth g], Q [auth h], R [auth i]	IPR018893	Type VIII secretion system, CsgF	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J [auth a], K [auth b], L [auth c], M [auth d], N [auth e], O [auth f], P [auth g], Q [auth h], R [auth i]	OPM	Transmembrane	Beta-barrel transmembrane	Curli-like transporters (n=36)	Curli-like transporters (n=36)

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G, H, I, J [auth a], K [auth b], L [auth c], M [auth d], N [auth e], O [auth f], P [auth g], Q [auth h], R [auth i]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G, H, I, J [auth a], K [auth b], L [auth c], M [auth d], N [auth e], O [auth f], P [auth g], Q [auth h], R [auth i]	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Beta-Barrel Membrane Proteins: Monomeric/Dimeric	CsgG-CsgF complex involved in curli biogenesis

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.