Structure of Xenopus laevis Cytoplasmic Ring subunit.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| X [auth b] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8105019 | 3002276 | SCOP2B (2022-06-29) |
| B | SCOP2 Family | Nucleoporin NUP85 | 8105018 | 4006614 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Coat and nuclear envelope proteins | 8105019 | 3002276 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I | PHD | e6lk8I01 | A: a/b three-layered sandwiches | X: Rossmann-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PHD | ECOD (v294.1) |
| H | WD40 | e6lk8H1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: WD40 | ECOD (v294.1) |
| DA [auth h] | DHDPS | e6lk8h1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: DHDPS | ECOD (v294.1) |
| G | PHD | e6lk8G01 | A: a/b three-layered sandwiches | X: Rossmann-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PHD | ECOD (v294.1) |
| F | WD40 | e6lk8F1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: WD40 | ECOD (v294.1) |
| BA [auth f] | DHDPS | e6lk8f1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: DHDPS | ECOD (v294.1) |
| E | WD40 | e6lk8E1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: WD40 | ECOD (v294.1) |
| AA [auth e] | e6lk8e1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: | ECOD (v294.1) | |
| Z [auth d] | DHDPS | e6lk8d1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: DHDPS | ECOD (v294.1) |
| D | WD40 | e6lk8D1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: WD40 | ECOD (v294.1) |
| Y [auth c] | WD40 | e6lk8c1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: WD40 | ECOD (v294.1) |
| C | DHDPS | e6lk8C1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: DHDPS | ECOD (v294.1) |
| X [auth b] | e6lk8b1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: | ECOD (v294.1) | |
| B | e6lk8B1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: | ECOD (v294.1) | |
| N [auth V] | DHDPS | e6lk8V1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: DHDPS | ECOD (v294.1) |
| M [auth U] | Myb_DNA-binding | e6lk8U1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Myb_DNA-binding | ECOD (v294.1) |
| L [auth T] | DHDPS | e6lk8T1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: DHDPS | ECOD (v294.1) |
| K [auth S] | DHDPS | e6lk8S1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: DHDPS | ECOD (v294.1) |
| J | DHDPS | e6lk8J1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: DHDPS | ECOD (v294.1) |
| FA [auth j] | e6lk8j1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| EA [auth i], I | PF04121 | Nuclear pore protein 84 / 107 (Nup84_Nup100) | Nuclear pore protein 84 / 107 | - | Family |
| DA [auth h], H | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| BA [auth f], F | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| D, Z [auth d] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| C, Y [auth c] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| B, X [auth b] | PF07575 | Nup85 Nucleoporin (Nucleopor_Nup85) | Nup85 Nucleoporin | - | Repeat |
| FA [auth j], J | PF03177 | Non-repetitive/WGA-negative nucleoporin C-terminal (Nucleoporin_C) | Non-repetitive/WGA-negative nucleoporin C-terminal | - | Repeat |
| FA [auth j], J | PF08801 | Nup133 N terminal like (Nucleoporin_N) | Nup133 N terminal like | - | Repeat |
| A, W [auth a] | PF11894 | Nuclear pore complex scaffold, nucleoporins 186/192/205 (Nup192) | Nuclear pore complex scaffold, nucleoporins 186/192/205 | - | Repeat |














