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 6LCG | pdb_00006lcg

Structure of D-carbamoylase mutant from Nitratireductor indicus

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd6lcgb_ Alpha and beta proteins (a+b) Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase automated matches automated matches (Nitratireductor indicus C115 ) [TaxId: 1231190 ], SCOPe (2.08)
Ad6lcga_ Alpha and beta proteins (a+b) Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase automated matches automated matches (Nitratireductor indicus C115 ) [TaxId: 1231190 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyCarbon-nitrogen hydrolases 8101459 3001086 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCarbon-nitrogen hydrolases 8101459 3001086 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRrp44_S1e6lcgB1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Rrp44_S1ECOD (v295.2)
ARrp44_S1e6lcgA1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Rrp44_S1ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00795Carbon-nitrogen hydrolase (CN_hydrolase)Carbon-nitrogen hydrolaseThis family contains hydrolases that break carbon-nitrogen bonds [1]. The family includes: Nitrilase EC:3.5.5.1 Swiss:Q42965, Aliphatic amidase EC:3.5.1.4 Swiss:Q01360, Biotidinase EC:3.5.1.12 Swiss:P43251, Beta-ureidopropionase EC:3.5.1.6 Swiss:Q03 ...This family contains hydrolases that break carbon-nitrogen bonds [1]. The family includes: Nitrilase EC:3.5.5.1 Swiss:Q42965, Aliphatic amidase EC:3.5.1.4 Swiss:Q01360, Biotidinase EC:3.5.1.12 Swiss:P43251, Beta-ureidopropionase EC:3.5.1.6 Swiss:Q03248. Nitrilase-related proteins generally have a conserved E-K-C catalytic triad, and are multimeric alpha-beta-beta-alpha sandwich proteins [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
N-carbamoyl-D-amino-acid hydrolase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036526Carbon-nitrogen hydrolase superfamilyHomologous Superfamily
A, B
IPR050345Aliphatic Amidase/Beta-UreidopropionaseFamily
A, B
IPR003010Carbon-nitrogen hydrolaseDomain