6L4P | pdb_00006l4p

Crystal structure of the complex between the axonemal outer-arm dynein light chain-1 and microtubule binding domain of gamma heavy chain

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6l4pa_	Alpha and beta proteins (a/b)	Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)	Outer arm dynein light chain 1	Outer arm dynein light chain 1	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Outer arm dynein light chain 1	8032782	3001038	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Fungal_lectin	e6l4pB1	A: a/b three-layered sandwiches	X: Family A G protein-coupled receptor-like	H: Sodium/proton antiporter subunits-like	T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related	F: Fungal_lectin	ECOD (v294.1)
A	Fungal_lectin	e6l4pA1	A: a/b three-layered sandwiches	X: Family A G protein-coupled receptor-like	H: Sodium/proton antiporter subunits-like	T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related	F: Fungal_lectin	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Flagellar outer dynein arm heavy chain gamma	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding dynein light intermediate chain binding protein binding microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity minus-end-directed microtubule motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity dynein intermediate chain binding	cilium-dependent cell motility cellular process microtubule-based movement microtubule-based process cilium movement involved in cell motility cilium movement cell motility cilium or flagellum-dependent cell motility organelle assembly plasma membrane bounded cell projection organization axonemal dynein complex assembly protein-containing complex organization cell projection organization microtubule cytoskeleton organization cilium-dependent cell motility cellular process microtubule-based movement microtubule-based process cilium movement involved in cell motility cilium movement cell motility cilium or flagellum-dependent cell motility organelle assembly plasma membrane bounded cell projection organization axonemal dynein complex assembly protein-containing complex organization cell projection organization microtubule cytoskeleton organization plasma membrane bounded cell projection assembly cellular component organization cellular component biogenesis microtubule bundle formation organelle organization cellular component assembly outer dynein arm assembly protein-containing complex assembly cilium assembly cellular component organization or biogenesis axoneme assembly cytoskeleton organization cilium organization cell projection assembly	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium motile cilium plasma membrane bounded cell projection protein-containing complex intracellular anatomical structure catalytic complex dynein complex intracellular membraneless organelle intracellular organelle cytoskeleton membrane-bounded organelle cell projection cellular anatomical structure organelle cilium motile cilium plasma membrane bounded cell projection protein-containing complex intracellular anatomical structure catalytic complex dynein complex intracellular membraneless organelle intracellular organelle cytoskeleton membraneless organelle microtubule associated complex microtubule cytoskeleton polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
A	Dynein light chain 1, axonemal	-	-	membrane-bounded organelle protein-containing complex outer dynein arm intracellular anatomical structure catalytic complex axoneme ciliary plasm axonemal dynein complex dynein complex intracellular membraneless organelle cilium plasma membrane bounded cell projection intracellular organelle cell projection membrane-bounded organelle protein-containing complex outer dynein arm intracellular anatomical structure catalytic complex axoneme ciliary plasm axonemal dynein complex dynein complex intracellular membraneless organelle cilium plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure cytoskeleton organelle membraneless organelle microtubule associated complex cytoplasm microtubule cytoskeleton polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR026983	Dynein heavy chain	Family
B	IPR013602	Dynein heavy chain, linker	Domain
B	IPR042219	Dynein heavy chain, AAA lid domain superfamily	Homologous Superfamily
B	IPR035706	Dynein heavy chain, ATP-binding dynein motor region	Domain
B	IPR041228	Dynein heavy chain, C-terminal domain	Domain
B	IPR003593	AAA+ ATPase domain	Domain
B	IPR041658	Dynein heavy chain, AAA lid domain	Domain
B	IPR056759	Dynein axonemal heavy chain 2/5/8, coiled-coil domain	Domain
B	IPR041466	Dynein heavy chain, AAA 5 extension domain	Domain
B	IPR041589	Dynein heavy chain 3, AAA+ lid domain	Domain
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B	IPR042228	Dynein heavy chain, linker, subdomain 3	Homologous Superfamily
B	IPR035699	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Domain
B	IPR024743	Dynein heavy chain, coiled coil stalk	Domain
B	IPR013594	Dynein heavy chain, tail	Domain
B	IPR043157	Dynein heavy chain, AAA1 domain, small subdomain	Homologous Superfamily
B	IPR004273	Dynein heavy chain, D6 P-loop domain	Domain
B	IPR042222	Dynein heavy chain, domain 2, N-terminal	Homologous Superfamily
B	IPR043160	Dynein heavy chain, C-terminal domain, barrel region	Homologous Superfamily
B	IPR024317	Dynein heavy chain, AAA module D4	Domain
A	IPR025875	Leucine rich repeat 4	Repeat
A	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A	IPR001611	Leucine-rich repeat	Repeat