6L3Y
Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum complexed with L-lysine and Clado-C
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d6l3yb1 | All beta proteins | OB-fold | Nucleic acid-binding proteins | automated matches | automated matches | (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], | SCOPe (2.08) |
A [auth B] | d6l3yb2 | Alpha and beta proteins (a+b) | Class II aaRS and biotin synthetases | Class II aaRS and biotin synthetases | automated matches | automated matches | (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], | SCOPe (2.08) |
B [auth A] | d6l3ya1 | All beta proteins | OB-fold | Nucleic acid-binding proteins | automated matches | automated matches | (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], | SCOPe (2.08) |
B [auth A] | d6l3ya2 | Alpha and beta proteins (a+b) | Class II aaRS and biotin synthetases | Class II aaRS and biotin synthetases | automated matches | automated matches | (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF01336 | e6l3yB2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF01336 | ECOD (1.6) |
A [auth B] | PF00152 | e6l3yB1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: PF00152 | ECOD (1.6) |
B [auth A] | PF01336 | e6l3yA2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF01336 | ECOD (1.6) |
B [auth A] | PF00152 | e6l3yA1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: PF00152 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF01336 | OB-fold nucleic acid binding domain (tRNA_anti-codon) | OB-fold nucleic acid binding domain | This family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an a ... | Domain |