6KRN

Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF17189	e6krnA2	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycosyl hydrolase domain (From Topology)	T: Glycosyl hydrolase domain	F: PF17189	ECOD (1.6)
A	PF14587	e6krnA1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF14587	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF17189	Glycosyl hydrolase family 30 beta sandwich domain (Glyco_hydro_30C)	Glycosyl hydrolase family 30 beta sandwich domain	-	Domain
A	PF14587	O-Glycosyl hydrolase family 30 (Glyco_hydr_30_2)	O-Glycosyl hydrolase family 30	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Mating factor alpha,GH30 Xylanase B	glucosylceramidase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	membrane lipid metabolic process organonitrogen compound metabolic process organic substance metabolic process cellular metabolic process cellular lipid metabolic process sphingolipid metabolic process metabolic process primary metabolic process cellular process lipid metabolic process carbohydrate metabolic process xylan catabolic process catabolic process hemicellulose metabolic process membrane lipid metabolic process organonitrogen compound metabolic process organic substance metabolic process cellular metabolic process cellular lipid metabolic process sphingolipid metabolic process metabolic process primary metabolic process cellular process lipid metabolic process carbohydrate metabolic process xylan catabolic process catabolic process hemicellulose metabolic process cell wall organization or biogenesis carbohydrate catabolic process hemicellulose catabolic process macromolecule catabolic process cell wall macromolecule catabolic process xylan metabolic process polysaccharide metabolic process polysaccharide catabolic process macromolecule metabolic process cell wall polysaccharide metabolic process organic substance catabolic process cell wall macromolecule metabolic process cell wall polysaccharide catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR033452	Glycosyl hydrolase family 30, beta sandwich domain	Domain
A	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A	IPR001139	Glycoside hydrolase family 30	Family
A	IPR039514	Endo-beta-1,6-galactanase-like	Domain
A	IPR013780	Glycosyl hydrolase, all-beta	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.