6JMT | pdb_00006jmt

Crystal structure of GIT/PIX complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Fer4+Fer4_7	e6jmtF1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Fer4+Fer4_7	ECOD (v294.1)
E	Arf, G-alpha	e6jmtE1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Arf, G-alpha	ECOD (v294.1)
D [auth C]	Arf, G-alpha	e6jmtC1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Arf, G-alpha	ECOD (v294.1)
C [auth B]	Arf, G-alpha	e6jmtB1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Arf, G-alpha	ECOD (v294.1)
B [auth D]	Arf, G-alpha	e6jmtD1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Arf, G-alpha	ECOD (v294.1)
A	Ank, ArfGap, GIT_SHD, Ank_2	e6jmtA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Ank, ArfGap, GIT_SHD, Ank_2	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	1.10.220.150	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (utative)
C [auth B]	1.10.220.150	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (utative)
B [auth D]	1.10.220.150	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	PF12796	Ankyrin repeats (3 copies) (Ank_2)	Ankyrin repeats (3 copies)	-	Repeat
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	PF08518	Spa2 homology domain (SHD) of GIT (GIT_SHD)	Spa2 homology domain (SHD) of GIT	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	beta PIX	protein binding binding ATP-dependent protein binding cytoskeletal protein binding gamma-tubulin binding tubulin binding kinase binding enzyme binding protein kinase binding GTPase regulator activity enzyme regulator activity guanyl-nucleotide exchange factor activity nucleoside-triphosphatase regulator activity molecular function regulator activity	developmental process multicellular organismal process cellular developmental process glial cell migration nervous system development neurogenesis multicellular organism development gliogenesis cell differentiation anatomical structure development astrocyte cell migration cellular process cell migration cell motility developmental process multicellular organismal process cellular developmental process glial cell migration nervous system development neurogenesis multicellular organism development gliogenesis cell differentiation anatomical structure development astrocyte cell migration cellular process cell migration cell motility system development lamellipodium assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component organization cellular component biogenesis cellular component assembly lamellipodium organization cellular component organization or biogenesis cell projection assembly actin cytoskeleton organization postsynapse organization postsynaptic cytoskeleton organization organelle organization cell junction organization postsynaptic actin cytoskeleton organization actin filament-based process synapse organization cytoskeleton organization regulation of biological process positive regulation of programmed cell death regulation of cellular process regulation of apoptotic process biological regulation positive regulation of biological process regulation of programmed cell death cell death positive regulation of apoptotic process apoptotic process programmed cell death positive regulation of cellular process regulation of cytoskeleton organization regulation of microtubule polymerization or depolymerization regulation of cellular component organization microtubule cytoskeleton organization negative regulation of biological process regulation of protein-containing complex assembly microtubule polymerization or depolymerization protein-containing complex assembly negative regulation of cellular process negative regulation of microtubule nucleation negative regulation of protein polymerization negative regulation of supramolecular fiber organization protein polymerization negative regulation of cellular component organization negative regulation of microtubule polymerization or depolymerization protein-containing complex organization negative regulation of cytoskeleton organization regulation of microtubule-based process negative regulation of microtubule polymerization microtubule polymerization regulation of cellular component biogenesis regulation of microtubule nucleation regulation of organelle organization negative regulation of protein-containing complex assembly microtubule nucleation negative regulation of organelle organization regulation of microtubule polymerization regulation of protein polymerization regulation of supramolecular fiber organization microtubule-based process supramolecular fiber organization regulation of microtubule cytoskeleton organization hemopoiesis cell development hematopoietic progenitor cell differentiation cellular response to stimulus small GTPase-mediated signal transduction response to stimulus signaling Rho protein signal transduction intracellular signal transduction cell communication intracellular signaling cassette signal transduction positive regulation of cell communication regulation of localization regulation of hormone secretion nitrogen compound transport regulation of peptide secretion transport positive regulation of secretion by cell hormone secretion localization peptide secretion regulation of secretion by cell secretion by cell positive regulation of hormone secretion positive regulation of secretion signal release regulation of biological quality regulation of peptide hormone secretion positive regulation of peptide secretion regulation of signaling growth hormone secretion regulation of transport secretion regulation of hormone levels regulation of growth hormone secretion regulation of peptide transport positive regulation of peptide hormone secretion export from cell cell-cell signaling establishment of localization regulation of secretion peptide transport positive regulation of growth hormone secretion positive regulation of transport peptide hormone secretion regulation of cell communication hormone transport positive regulation of signaling Golgi organization endomembrane system organization presynapse organization presynaptic actin cytoskeleton organization presynaptic cytoskeleton organization	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction cell projection cell leading edge plasma membrane bounded cell projection lamellipodium cell periphery cell cortex intracellular anatomical structure cytoplasm intracellular organelle cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction cell projection cell leading edge plasma membrane bounded cell projection lamellipodium cell periphery cell cortex intracellular anatomical structure cytoplasm intracellular organelle centrosome microtubule organizing center cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton cytosol plasma membrane membrane growth cone axon distal axon neuron projection site of polarized growth protein-containing complex GABA-ergic synapse synapse ruffle storage vacuole membrane-bounded organelle vacuole intracellular membrane-bounded organelle somatodendritic compartment cell body neuronal cell body mitotic spindle spindle mitotic spindle pole spindle pole postsynapse
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	ARF GTPase-activating protein GIT2	small GTPase binding protein binding binding enzyme binding GTPase binding protein-containing complex binding GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity cation binding small GTPase binding protein binding binding enzyme binding GTPase binding protein-containing complex binding GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process response to stimulus signaling biological regulation regulation of signal transduction cell communication regulation of response to stimulus regulation of cell communication G protein-coupled receptor signaling pathway cellular process signal transduction regulation of G protein-coupled receptor signaling pathway small GTPase-mediated signal transduction regulation of small GTPase mediated signal transduction ARF protein signal transduction intracellular signal transduction regulation of intracellular signal transduction regulation of ARF protein signal transduction intracellular signaling cassette synaptic vesicle recycling localization cellular localization transport establishment of localization in cell synaptic vesicle cycle establishment of localization vesicle-mediated transport vesicle-mediated transport in synapse regulation of localization regulated exocytosis modulation of chemical synaptic transmission synaptic vesicle exocytosis regulation of regulated secretory pathway synaptic signaling regulation of secretion by cell secretion by cell signal release trans-synaptic signaling neurotransmitter secretion regulation of transport secretion regulation of neurotransmitter transport regulation of synaptic vesicle exocytosis export from cell cell-cell signaling neurotransmitter transport regulation of vesicle-mediated transport regulation of secretion chemical synaptic transmission signal release from synapse regulation of trans-synaptic signaling exocytosis regulation of neurotransmitter secretion anterograde trans-synaptic signaling regulation of exocytosis behavior response to stress multicellular organismal response to stress response to pain behavioral response to pain	axon synapse neuron projection axon terminus plasma membrane bounded cell projection presynapse cell projection cellular anatomical structure distal axon calyx of Held cell junction neuron projection terminus membrane-bounded organelle intracellular anatomical structure axon synapse neuron projection axon terminus plasma membrane bounded cell projection presynapse cell projection cellular anatomical structure distal axon calyx of Held cell junction neuron projection terminus membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR001849	Pleckstrin homology domain	Domain
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR000219	Dbl homology domain	Domain
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR035789	Rho guanine nucleotide exchange factor 7, SH3 domain	Domain
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR001715	Calponin homology domain	Domain
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR036028	SH3-like domain superfamily	Homologous Superfamily
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR032409	Rho guanine nucleotide exchange factor 6/7, coiled-coil domain	Domain
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR011993	PH-like domain superfamily	Homologous Superfamily
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR001331	Guanine-nucleotide dissociation stimulator, CDC24, conserved site	Conserved Site
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR001452	SH3 domain	Domain
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR036872	CH domain superfamily	Homologous Superfamily
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR035899	Dbl homology (DH) domain superfamily	Homologous Superfamily
G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], G [auth I], H [auth J], I [auth K], J [auth L], K [auth M], L [auth N]	IPR046376	RhoGEF 6/7, PH domain	Domain
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	IPR002110	Ankyrin repeat	Repeat
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	IPR013724	GIT, Spa2 homology (SHD) domain	Domain
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	IPR022018	ARF GTPase-activating protein GIT1, C-terminal	Domain
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	IPR036770	Ankyrin repeat-containing domain superfamily	Homologous Superfamily
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	IPR037278	ARFGAP/RecO-like zinc finger	Homologous Superfamily
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	IPR001164	Arf GTPase activating protein	Domain
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	IPR047161	ARF GTPase-activating protein Git-like	Family
A, B [auth D], C [auth B], D [auth C], E, A, B [auth D], C [auth B], D [auth C], E, F	IPR038508	ArfGAP domain superfamily	Homologous Superfamily