6JLA | pdb_00006jla

Crystal structure of a mouse ependymin related protein

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth C]	Pico_P1A	e6jlaC1	A: a/b three-layered sandwiches	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Family A G protein-coupled receptor-like	F: Pico_P1A	ECOD (v294.1)
C [auth D]	MacB_PCD	e6jlaD1	A: a/b three-layered sandwiches	X: Family A G protein-coupled receptor-like	H: Sodium/proton antiporter subunits-like	T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related	F: MacB_PCD	ECOD (v294.1)
B	Pico_P1A	e6jlaB1	A: a/b three-layered sandwiches	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Family A G protein-coupled receptor-like	F: Pico_P1A	ECOD (v294.1)
A	Pico_P1A	e6jlaA1	A: a/b three-layered sandwiches	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Family A G protein-coupled receptor-like	F: Pico_P1A	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth D], D [auth C]	PF00811	Ependymin (Ependymin)	Ependymin		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C [auth D], D [auth C]	Mammalian ependymin-related protein 1	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding phospholipid binding lipid binding ganglioside GM1 binding organic acid binding ceramide binding sphingolipid binding glycolipid binding glycosphingolipid binding cation binding ion binding binding calcium ion binding metal ion binding small molecule binding phospholipid binding lipid binding ganglioside GM1 binding organic acid binding ceramide binding sphingolipid binding glycolipid binding glycosphingolipid binding ganglioside binding anion binding carboxylic acid binding carbohydrate derivative binding identical protein binding protein binding	cell adhesion cell-matrix adhesion cell-substrate adhesion cellular process actin filament-based process myofibroblast contraction actin-mediated cell contraction actin filament-based movement	cellular anatomical structure extracellular region membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen lytic vacuole vacuolar lumen vacuole intracellular membrane-bounded organelle lysosomal lumen intracellular organelle lumen intracellular organelle organelle lumen organelle cellular anatomical structure extracellular region membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen lytic vacuole vacuolar lumen vacuole intracellular membrane-bounded organelle lysosomal lumen intracellular organelle lumen intracellular organelle organelle lumen organelle cytoplasm lysosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth D], D [auth C]	IPR001299	Ependymin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.