6J6A
Crystal structure of TldE from Thermococcus kodakarensis
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF19289 | e6j6aA1 | A: beta barrels | X: barrel domain in putative modulator of DNA gyrase, PmbA/TldD (From Topology) | H: barrel domain in putative modulator of DNA gyrase, PmbA/TldD (From Topology) | T: barrel domain in putative modulator of DNA gyrase, PmbA/TldD | F: PF19289 | ECOD (1.6) |
A | PF01523 | e6j6aA2 | A: a+b two layers | X: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) (From Topology) | H: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) (From Topology) | T: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | F: PF01523 | ECOD (1.6) |
A | PF19290 | e6j6aA3 | A: a+b two layers | X: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) (From Topology) | H: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) (From Topology) | T: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | F: PF19290 | ECOD (1.6) |
B | PF19289 | e6j6aB1 | A: beta barrels | X: barrel domain in putative modulator of DNA gyrase, PmbA/TldD (From Topology) | H: barrel domain in putative modulator of DNA gyrase, PmbA/TldD (From Topology) | T: barrel domain in putative modulator of DNA gyrase, PmbA/TldD | F: PF19289 | ECOD (1.6) |
B | PF01523 | e6j6aB2 | A: a+b two layers | X: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) (From Topology) | H: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) (From Topology) | T: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | F: PF01523 | ECOD (1.6) |
B | PF19290 | e6j6aB3 | A: a+b two layers | X: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) (From Topology) | H: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) (From Topology) | T: a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | F: PF19290 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF19289 | PmbA/TldA metallopeptidase C-terminal domain (PmbA_TldD_3rd) | PmbA/TldA metallopeptidase C-terminal domain | This entry represents a group of metalloproteases. The tertiary structure of the Escherichia coli TdlD/TdlE complex has been solved, and shows that the TdlD subunit is the active peptidase, binding a single zinc ion at an HEXXXH motif in which the gl ... | Domain | |
PF19290 | PmbA/TldA metallopeptidase central domain (PmbA_TldD_2nd) | PmbA/TldA metallopeptidase central domain | This entry represents a group of metalloproteases. The tertiary structure of the Escherichia coli TdlD/TdlE complex has been solved, and shows that the TdlD subunit is the active peptidase, binding a single zinc ion at an HEXXXH motif in which the gl ... | Domain | |
PF01523 | PmbA/TldA metallopeptidase domain 1 (PmbA_TldD_1st) | PmbA/TldA metallopeptidase domain 1 | This entry represents a group of metalloproteases. The tertiary structure of the Escherichia coli TdlD/TdlE complex has been solved, and shows that the TdlD subunit is the active peptidase, binding a single zinc ion at an HEXXXH motif in which the gl ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Zinc-dependent protease, TldD/PmbA family |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002510 | Metalloprotease TldD/E, N-terminal domain | Domain | |
IPR036059 | Metalloprotease TldD/PmbA superfamily | Homologous Superfamily | |
IPR035068 | Metalloprotease TldD/PmbA, N-terminal | Homologous Superfamily | |
IPR045570 | Metalloprotease TldD/E, central domain | Domain | |
IPR045569 | Metalloprotease TldD/E, C-terminal domain | Domain | |
IPR047657 | Metalloprotease PmbA | Family |