6J2Y | pdb_00006j2y

Solution structure of translationally controlled tumor protein from photosynthetic microalga Nannochloropsis oceanica

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6j2ya1	All beta proteins	Mss4-like	Mss4-like	automated matches	automated matches	(Nannochloropsis oceanica ) [TaxId: 145522 ],	SCOPe (2.08)
A	d6j2ya2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Nannochloropsis oceanica ) [TaxId: 145522 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Translationally controlled tumor protein TCTP (histamine-releasing factor)	8096873	4003296	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Mss4-like	8096874	3001994	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Tfb4	e6j2yA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Tfb4	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	NoTCTP	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR018105	Translationally controlled tumour protein	Family
A	IPR034737	Translationally controlled tumour protein (TCTP) domain	Domain
A	IPR011057	Mss4-like superfamily	Homologous Superfamily
A	IPR011323	Mss4/translationally controlled tumour-associated TCTP	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.