Human nucleosome core particle containing 145 bp of DNA
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Histone | e6ipuA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
| E | Histone | e6ipuE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
| F | Histone | e6ipuF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
| D | Histone | e6ipuD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
| H | Histone | e6ipuH1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
| G | Histone | e6ipuG1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
| C | Histone | e6ipuC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
| B | Histone | e6ipuB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Histone | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| E | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| F | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| D | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| H | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| G | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| C | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| B | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00125 | Core histone H2A/H2B/H3/H4 domain (Histone) | Core histone H2A/H2B/H3/H4 domain | Domain | ||
| PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain | |
| PF00125 | Core histone H2A/H2B/H3/H4 domain (Histone) | Core histone H2A/H2B/H3/H4 domain | Domain | ||
| PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family | |
| PF00125 | Core histone H2A/H2B/H3/H4 domain (Histone) | Core histone H2A/H2B/H3/H4 domain | Domain | ||
| PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |














