6ILP | pdb_00006ilp

Cryo-EM structure of full Echovirus 6 particle at PH 7.4

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Cd6ilpc_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) automated matches (Echovirus E6 ) [TaxId: 12062 ], SCOPe (2.08)
Ad6ilpa_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) automated matches (Echovirus E6 ) [TaxId: 12062 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DDnaB_C, TIP49e6ilpD1 A: alpha bundlesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DnaB_C, TIP49ECOD (develop294)
CDnaB_C, TIP49e6ilpC1 A: alpha bundlesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DnaB_C, TIP49ECOD (develop294)
BDnaB_C, TIP49e6ilpB1 A: alpha bundlesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DnaB_C, TIP49ECOD (develop294)
ADnaB_C, TIP49e6ilpA1 A: alpha bundlesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DnaB_C, TIP49ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
B2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
A2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)