6HV6 | pdb_00006hv6

Crystal structure of PatoxP, a cysteine protease-like domain of Photorhabdus asymbiotica toxin PaTox

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UNK_F_TYPE	e6hv6A1	A: alpha complex topology	X: uncharacterized domain of PaTox (From Topology)	H: uncharacterized domain of PaTox (From Topology)	T: uncharacterized domain of PaTox	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e6hv6A2	A: a+b complex topology	X: Cysteine proteinases-like	H: Cysteine proteinases (From Topology)	T: Cysteine proteinases	F: UNK_F_TYPE	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Toxin PAU_02230	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding catalytic activity, acting on a protein hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity protein-glutamine glutaminase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds glycosyltransferase activity mannosyltransferase activity cation binding ion binding binding calcium ion binding metal ion binding small molecule binding catalytic activity, acting on a protein hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity protein-glutamine glutaminase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds glycosyltransferase activity mannosyltransferase activity transferase activity hexosyltransferase activity toxin activity UDP-glycosyltransferase activity protein N-acetylglucosaminyltransferase activity acetylglucosaminyltransferase activity	sphingolipid biosynthetic process glycolipid metabolic process lipid biosynthetic process carbohydrate derivative metabolic process phospholipid metabolic process mannosyl-inositol phosphorylceramide biosynthetic process mannosyl-inositol phosphorylceramide metabolic process phosphate-containing compound metabolic process phosphorus metabolic process membrane lipid metabolic process carbohydrate derivative biosynthetic process glycosphingolipid metabolic process liposaccharide metabolic process primary metabolic process sphingolipid biosynthetic process glycolipid metabolic process lipid biosynthetic process carbohydrate derivative metabolic process phospholipid metabolic process mannosyl-inositol phosphorylceramide biosynthetic process mannosyl-inositol phosphorylceramide metabolic process phosphate-containing compound metabolic process phosphorus metabolic process membrane lipid metabolic process carbohydrate derivative biosynthetic process glycosphingolipid metabolic process liposaccharide metabolic process primary metabolic process glycolipid biosynthetic process sphingolipid metabolic process inositol phosphoceramide metabolic process phospholipid biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process glycosphingolipid biosynthetic process metabolic process cellular process membrane lipid biosynthetic process lipid metabolic process cellular response to stimulus symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms regulation of cellular process small GTPase-mediated signal transduction response to stimulus signaling regulation of small GTPase mediated signal transduction regulation of signal transduction intracellular signal transduction biological process involved in symbiotic interaction cell communication symbiont-mediated perturbation of host process regulation of intracellular signal transduction intracellular signaling cassette signal transduction symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism regulation of biological process regulation of signaling symbiont-mediated perturbation of host small GTPase-mediated signal transduction biological regulation biological process involved in interaction with host regulation of response to stimulus symbiont-mediated perturbation of host Rho small GTPase signal transduction regulation of cell communication	cellular anatomical structure membrane extracellular region host cell plasma membrane host cellular component host cell part host cell membrane other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR007577	Glycosyltransferase, DXD sugar-binding motif	Conserved Site
A	IPR029044	Nucleotide-diphospho-sugar transferases	Homologous Superfamily
A	IPR028907	Tox-PLDMTX domain	Domain
A	IPR051706	Glycosyltransferase domain-containing protein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.