6HQ5 | pdb_00006hq5

Structure of EAL Enzyme Bd1971 - cAMP and cyclic-di-GMP bound form


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BcNMP_bindinge6hq5B2 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: cNMP_bindingECOD (1.6)
BEALe6hq5B1 A: a/b barrelsX: TIM beta/alpha-barrelH: EAL domain (From Topology)T: EAL domainF: EALECOD (1.6)
AcNMP_bindinge6hq5A2 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: cNMP_bindingECOD (1.6)
AEALe6hq5A1 A: a/b barrelsX: TIM beta/alpha-barrelH: EAL domain (From Topology)T: EAL domainF: EALECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.20.450 Alpha Beta Alpha-Beta Barrel TIM Barrel EAL domainCATH (utative)
A3.20.20.450 Alpha Beta Alpha-Beta Barrel TIM Barrel EAL domainCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00563EAL domain (EAL)EAL domainThis domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function [1]. The domain contains many conserved acidic residues that ...This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function [1]. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site [1].
Domain
A, B
PF00027Cyclic nucleotide-binding domain (cNMP_binding)Cyclic nucleotide-binding domainThis domain sensor domain can bind cAMP, cGMP, c-di-GMP, oxygen and 2-oxoglutarate (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). Domain