6HBL | pdb_00006hbl

Echovirus 18 Open particle without three pentamers


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AMS_channel_2nde6hblA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
B [auth q]MS_channel_2nde6hblq1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
CA [auth P]MS_channel_2nde6hblP1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
E [auth n]MS_channel_2nde6hbln1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
FA [auth M]MS_channel_2nde6hblM1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
H [auth k]MS_channel_2nde6hblk1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
IA [auth J]MS_channel_2nde6hblJ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
K [auth h]MS_channel_2nde6hblh1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
LA [auth G]MS_channel_2nde6hblG1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
N [auth e]MS_channel_2nde6hble1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
OA [auth D]MS_channel_2nde6hblD1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
Q [auth b]MS_channel_2nde6hblb1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
T [auth Y]MS_channel_2nde6hblY1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
W [auth V]MS_channel_2nde6hblV1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
Z [auth S]MS_channel_2nde6hblS1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
AA [auth T]MS_channel_2nde6hblT1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
C [auth r]MS_channel_2nde6hblr1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
DA [auth Q]MS_channel_2nde6hblQ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
F [auth o]MS_channel_2nde6hblo1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
GA [auth N]MS_channel_2nde6hblN1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
I [auth l]MS_channel_2nde6hbll1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
JA [auth K]MS_channel_2nde6hblK1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
L [auth i]MS_channel_2nde6hbli1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
MA [auth H]MS_channel_2nde6hblH1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
O [auth f]MS_channel_2nde6hblf1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
PA [auth E]MS_channel_2nde6hblE1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
R [auth c]MS_channel_2nde6hblc1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
SA [auth B]MS_channel_2nde6hblB1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
U [auth Z]MS_channel_2nde6hblZ1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
X [auth W]MS_channel_2nde6hblW1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
BA [auth U]MS_channel_2nde6hblU1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
D [auth s]MS_channel_2nde6hbls1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
EA [auth R]MS_channel_2nde6hblR1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
G [auth p]MS_channel_2nde6hblp1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
HA [auth O]MS_channel_2nde6hblO1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
J [auth m]MS_channel_2nde6hblm1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
KA [auth L]MS_channel_2nde6hblL1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
M [auth j]MS_channel_2nde6hblj1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
NA [auth I]MS_channel_2nde6hblI1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
P [auth g]MS_channel_2nde6hblg1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
QA [auth F]MS_channel_2nde6hblF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
RA [auth C]MS_channel_2nde6hblC1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
S [auth d]MS_channel_2nde6hbld1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
V [auth a]MS_channel_2nde6hbla1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)
Y [auth X]MS_channel_2nde6hblX1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: MS_channel_2ndECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
B [auth q]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
CA [auth P]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
E [auth n]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
FA [auth M]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
H [auth k]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
IA [auth J]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
K [auth h]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
LA [auth G]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
N [auth e]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
OA [auth D]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
Q [auth b]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
T [auth Y]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
W [auth V]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
Z [auth S]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
AA [auth T]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
C [auth r]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
DA [auth Q]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
F [auth o]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
GA [auth N]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
I [auth l]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
JA [auth K]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
L [auth i]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
MA [auth H]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
O [auth f]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
PA [auth E]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
R [auth c]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
SA [auth B]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
U [auth Z]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
X [auth W]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
BA [auth U]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
D [auth s]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
EA [auth R]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
G [auth p]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
HA [auth O]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
J [auth m]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
KA [auth L]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
M [auth j]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
NA [auth I]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
P [auth g]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
QA [auth F]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
RA [auth C]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
S [auth d]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
V [auth a]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
Y [auth X]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Echovirus 18 capsid protein 1
Echovirus 18 capsid protein 2
Echovirus 18 capsid protein 3

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain