6H2F | pdb_00006h2f

Structure of the pre-pore AhlB of the tripartite alpha-pore forming toxin, AHL, from Aeromonas hydrophila.

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	Bacillus_HBL	e6h2fJ1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)
I	Bacillus_HBL	e6h2fI1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)
H	Bacillus_HBL	e6h2fH1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)
G	Bacillus_HBL	e6h2fG1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)
F	Bacillus_HBL	e6h2fF1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)
E	Bacillus_HBL	e6h2fE1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)
D	Bacillus_HBL	e6h2fD1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)
C	Bacillus_HBL	e6h2fC1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)
B	Bacillus_HBL	e6h2fB1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)
A	Bacillus_HBL	e6h2fA1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: Bacillus_HBL	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J	1.20.1170.10	Mainly Alpha	Up-down Bundle	Hemolysin E	Chain: A	CATH (utative)
H	1.20.1170.10	Mainly Alpha	Up-down Bundle	Hemolysin E	Chain: A	CATH (utative)
F	1.20.1170.10	Mainly Alpha	Up-down Bundle	Hemolysin E	Chain: A	CATH (utative)
D	1.20.1170.10	Mainly Alpha	Up-down Bundle	Hemolysin E	Chain: A	CATH (utative)
B	1.20.1170.10	Mainly Alpha	Up-down Bundle	Hemolysin E	Chain: A	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF05791	Bacillus haemolytic enterotoxin (HBL) (Bacillus_HBL)	Bacillus haemolytic enterotoxin (HBL)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	AhlB	-	-	cellular anatomical structure membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR008414	Hemolysin BL-binding component	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR052785	Enterotoxin complex component	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	OPM	Transmembrane	Alpha-helical polytopic	Pore-forming alpha-helical toxins	YaxAB toxins

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Adventitious Membrane Proteins: Alpha-helical Pore-forming Toxins.	tripartite α-pore forming toxin, decameric pore of AhlB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.