6GRJ

Structure of the AhlB pore of the tripartite alpha-pore forming toxin, AHL, from Aeromonas hydrophila.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth G]	PF05791	e6grjG1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)
E [auth C]	PF05791	e6grjC1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)
F [auth D]	PF05791	e6grjD1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)
H [auth F]	PF05791	e6grjF1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)
B [auth J]	PF05791	e6grjJ1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)
C [auth A]	PF05791	e6grjA1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)
D [auth B]	PF05791	e6grjB1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)
G [auth E]	PF05791	e6grjE1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)
I [auth H]	PF05791	e6grjH1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)
J [auth I]	PF05791	e6grjI1	A: alpha bundles	X: Bacterial hemolysins-like	H: Bacterial hemolysins (From Topology)	T: Bacterial hemolysins	F: PF05791	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth G], B [auth J], C [auth A], D [auth B], E [auth C], A [auth G], B [auth J], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I]	PF05791	Bacillus haemolytic enterotoxin (HBL) (Bacillus_HBL)	Bacillus haemolytic enterotoxin (HBL)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth G], B [auth J], C [auth A], D [auth B], E [auth C], A [auth G], B [auth J], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I]	AhlB	-	-	membrane cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth G], B [auth J], C [auth A], D [auth B], E [auth C], A [auth G], B [auth J], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I]	IPR008414	Hemolysin BL-binding component	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth G], B [auth J], C [auth A], D [auth B], E [auth C] A [auth G], B [auth J], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I]	OPM	Transmembrane	Alpha-helical polytopic	Pore-forming alpha-helical toxins	YaxAB toxins

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth G], B [auth J], C [auth A], D [auth B], E [auth C] A [auth G], B [auth J], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth G], B [auth J], C [auth A], D [auth B], E [auth C] A [auth G], B [auth J], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Adventitious Membrane Proteins: Alpha-helical Pore-forming Toxins.	tripartite α-pore forming toxin, decameric pore of AhlB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.