6GRG | pdb_00006grg

E. coli Microcin synthetase McbBCD complex with pro-MccB17, ADP and phosphate bound

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E [auth D]	UNK_F_TYPE	e6grgD2	A: a+b two layers	X: dsRBD-like	H: Heterocyclase TruD C-terminal domain (From Topology)	T: Heterocyclase TruD C-terminal domain	F: UNK_F_TYPE	ECOD (1.6)
D [auth C]	Nitroreductase	e6grgC1	A: a+b two layers	X: Alpha-beta plaits	H: FMN-dependent nitroreductase-like (From Topology)	T: FMN-dependent nitroreductase-like	F: Nitroreductase	ECOD (1.6)
C [auth 2]	UNK_F_TYPE	e6grg22	A: alpha arrays	X: HTH	H: HTH	T: winged	F: UNK_F_TYPE	ECOD (1.6)
C [auth 2]	UNK_F_TYPE	e6grg21	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: Activating enzymes of the ubiquitin-like proteins	F: UNK_F_TYPE	ECOD (1.6)
B [auth 1]	UNK_F_TYPE	e6grg12	A: alpha arrays	X: HTH	H: HTH	T: winged	F: UNK_F_TYPE	ECOD (1.6)
B [auth 1]	UNK_F_TYPE	e6grg11	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: Activating enzymes of the ubiquitin-like proteins	F: UNK_F_TYPE	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E [auth D]	Microcin B17-processing protein McbD	-	antibiotic metabolic process biosynthetic process metabolic process cellular process antibiotic biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm
D [auth C]	Microcin B17-processing protein McbC	oxidoreductase activity catalytic activity	antibiotic metabolic process biosynthetic process metabolic process cellular process antibiotic biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm
B [auth 1], C [auth 2]	Microcin B17-processing protein McbB	-	antibiotic metabolic process biosynthetic process metabolic process cellular process antibiotic biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm
A	Bacteriocin microcin B17	-	defense response to bacterium biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus regulation of cellular process negative regulation of biological process regulation of primary metabolic process nucleobase-containing compound metabolic process defense response to bacterium biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus regulation of cellular process negative regulation of biological process regulation of primary metabolic process nucleobase-containing compound metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process regulation of biological process negative regulation of DNA replication negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process DNA metabolic process nucleic acid metabolic process DNA replication negative regulation of DNA metabolic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process regulation of DNA replication disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism cell killing	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E [auth D]	IPR003776	YcaO-like domain	Domain
D [auth C]	IPR029479	Nitroreductase	Domain
D [auth C]	IPR000415	Nitroreductase-like	Homologous Superfamily
D [auth C]	IPR020051	SagB-type dehydrogenase domain	Domain
D [auth C]	IPR052544	Bacteriocin Processing Enzyme	Family
B [auth 1], C [auth 2]	IPR030956	Microcin B17-processing protein McbB	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.