6G9E

Crystal structure of immunomodulatory active chitinase from Trichuris suis - TsES1 - 6 molecules in ASU

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Chitinase insertion domain	8101050	3000666	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Chitinase insertion domain	8101050	3000666	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Chitinase insertion domain	8101050	3000666	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Chitinase insertion domain	8101050	3000666	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Chitinase insertion domain	8101050	3000666	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Chitinase insertion domain	8101050	3000666	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	(Trans)glycosidases	8096104	3000313	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	GH18_chitolectin_chitotriosidase	e6g9eA1	A: a+b two layers	X: FKBP-like	H: Chitinase insertion domain (From Topology)	T: Chitinase insertion domain	F: GH18_chitolectin_chitotriosidase	ECOD (1.6)
A	Glyco_hydro_18	e6g9eA2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_18	ECOD (1.6)
B	GH18_chitolectin_chitotriosidase	e6g9eB1	A: a+b two layers	X: FKBP-like	H: Chitinase insertion domain (From Topology)	T: Chitinase insertion domain	F: GH18_chitolectin_chitotriosidase	ECOD (1.6)
B	Glyco_hydro_18	e6g9eB2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_18	ECOD (1.6)
C	GH18_chitolectin_chitotriosidase	e6g9eC2	A: a+b two layers	X: FKBP-like	H: Chitinase insertion domain (From Topology)	T: Chitinase insertion domain	F: GH18_chitolectin_chitotriosidase	ECOD (1.6)
C	Glyco_hydro_18	e6g9eC1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_18	ECOD (1.6)
D	GH18_chitolectin_chitotriosidase	e6g9eD1	A: a+b two layers	X: FKBP-like	H: Chitinase insertion domain (From Topology)	T: Chitinase insertion domain	F: GH18_chitolectin_chitotriosidase	ECOD (1.6)
D	Glyco_hydro_18	e6g9eD2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_18	ECOD (1.6)
F	GH18_chitolectin_chitotriosidase	e6g9eF1	A: a+b two layers	X: FKBP-like	H: Chitinase insertion domain (From Topology)	T: Chitinase insertion domain	F: GH18_chitolectin_chitotriosidase	ECOD (1.6)
F	Glyco_hydro_18	e6g9eF2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_18	ECOD (1.6)
E	GH18_chitolectin_chitotriosidase	e6g9eE1	A: a+b two layers	X: FKBP-like	H: Chitinase insertion domain (From Topology)	T: Chitinase insertion domain	F: GH18_chitolectin_chitotriosidase	ECOD (1.6)
E	Glyco_hydro_18	e6g9eE2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_18	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF00704	Glycosyl hydrolases family 18 (Glyco_hydro_18)	Glycosyl hydrolases family 18	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Immunomodulatory active chitinase	chitin binding binding carbohydrate derivative binding chitinase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	organonitrogen compound catabolic process carbohydrate derivative catabolic process catabolic process organonitrogen compound metabolic process carbohydrate derivative metabolic process chitin metabolic process aminoglycan catabolic process macromolecule catabolic process glucosamine-containing compound catabolic process organic substance metabolic process amino sugar catabolic process aminoglycan metabolic process amino sugar metabolic process metabolic process organonitrogen compound catabolic process carbohydrate derivative catabolic process catabolic process organonitrogen compound metabolic process carbohydrate derivative metabolic process chitin metabolic process aminoglycan catabolic process macromolecule catabolic process glucosamine-containing compound catabolic process organic substance metabolic process amino sugar catabolic process aminoglycan metabolic process amino sugar metabolic process metabolic process macromolecule metabolic process organic substance catabolic process chitin catabolic process glucosamine-containing compound metabolic process carbohydrate metabolic process primary metabolic process	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR011583	Chitinase II	Domain
A, B, C, D, E A, B, C, D, E, F	IPR036508	Chitin binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR029070	Chitinase insertion domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR002557	Chitin binding domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR001579	Glycosyl hydrolases family 18 (GH18) active site	Active Site
A, B, C, D, E A, B, C, D, E, F	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR001223	Glycoside hydrolase family 18, catalytic domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.