6F8L | pdb_00006f8l

Thermus thermophilus PilF ATPase (AMPPNP-bound form)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
R [auth F]T2SSEe6f8lF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: T2SSEECOD (1.6)
Q [auth E]T2SSEe6f8lE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: T2SSEECOD (1.6)
P [auth D]T2SSEe6f8lD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: T2SSEECOD (1.6)
O [auth C]T2SSEe6f8lC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: T2SSEECOD (1.6)
N [auth B]T2SSEe6f8lB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: T2SSEECOD (1.6)
M [auth A]T2SSEe6f8lA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: T2SSEECOD (1.6)
L [auth R]nfrBe6f8lR2 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
L [auth R]T2SSE_Ne6f8lR1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: T2SSE_NECOD (1.6)
K [auth Q]nfrBe6f8lQ1 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
K [auth Q]T2SSE_Ne6f8lQ2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: T2SSE_NECOD (1.6)
J [auth P]nfrBe6f8lP2 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
J [auth P]UNK_F_TYPEe6f8lP1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: UNK_F_TYPEECOD (1.6)
I [auth O]nfrBe6f8lO2 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
I [auth O]UNK_F_TYPEe6f8lO1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: UNK_F_TYPEECOD (1.6)
H [auth N]nfrBe6f8lN1 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
H [auth N]UNK_F_TYPEe6f8lN2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: UNK_F_TYPEECOD (1.6)
G [auth M]nfrBe6f8lM1 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
G [auth M]T2SSE_Ne6f8lM2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: T2SSE_NECOD (1.6)
F [auth I]nfrBe6f8lI1 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
F [auth I]T2SSE_Ne6f8lI2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: T2SSE_NECOD (1.6)
E [auth H]nfrBe6f8lH1 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
E [auth H]T2SSE_Ne6f8lH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: T2SSE_NECOD (1.6)
D [auth L]nfrBe6f8lL1 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
D [auth L]UNK_F_TYPEe6f8lL2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: UNK_F_TYPEECOD (1.6)
C [auth K]nfrBe6f8lK1 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
C [auth K]UNK_F_TYPEe6f8lK2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: UNK_F_TYPEECOD (1.6)
B [auth J]nfrBe6f8lJ2 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
B [auth J]UNK_F_TYPEe6f8lJ1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: UNK_F_TYPEECOD (1.6)
A [auth G]nfrBe6f8lG1 A: alpha arraysX: MshE c-di-GMP-binding domain (From Topology)H: MshE c-di-GMP-binding domain (From Topology)T: MshE c-di-GMP-binding domainF: nfrBECOD (1.6)
A [auth G]T2SSE_Ne6f8lG2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: GSPII protein E N-terminal domain-like (From Topology)T: GSPII protein E N-terminal domain-likeF: T2SSE_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05157MshEN domain (MshEN)MshEN domainThis domain is found at the N-terminus of the Type II secretion secretion system protein E (GspE) and type IV pilus extensin ATPase PilB and near the C-terminus of the glycosyltransferase NfrB. A variant of this domain, called MshEN, binds cyclic di- ...This domain is found at the N-terminus of the Type II secretion secretion system protein E (GspE) and type IV pilus extensin ATPase PilB and near the C-terminus of the glycosyltransferase NfrB. A variant of this domain, called MshEN, binds cyclic di-GMP [4,6,7], which modulates the activity of the respective protein. The structure of this domain is now known [1,2,4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage