6F7S | pdb_00006f7s

Crystal structure of Human ARS2 residues 147-270 + 408-763 with deletion of loop B

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth C]	PF28978	e6f7sC01	A: a/b three-layered sandwiches	X: Rossmann-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF28978	ECOD (v294.1)
B [auth C]	AAA_lid_3	e6f7sC02	A: a/b three-layered sandwiches	X: Rossmann-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: AAA_lid_3	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth C], D	PF04959	Arsenite-resistance protein 2 (ARS2)	Arsenite-resistance protein 2	-	Family
A, C [auth B]	PF12066	SERRATE/Ars2, N-terminal domain (SERRATE_Ars2_N)	SERRATE/Ars2, N-terminal domain	This domain can be found in the N terminus of the SERRATE (SE) from plants and its homologue, Ars2, from animals. They play a role in nuclear RNA metabolism. They interact with the nuclear cap-binding complex (CBC) and mediates interactions with dive ...	This domain can be found in the N terminus of the SERRATE (SE) from plants and its homologue, Ars2, from animals. They play a role in nuclear RNA metabolism. They interact with the nuclear cap-binding complex (CBC) and mediates interactions with diverse RNA processing and transport machineries in a transcript-dependent manner. Interestingly, the plant SERRATE does not have the RNA recognition motif (RRM) domain found in metazoans and S. pombe [1]. This domain has two completely conserved Y residues that may be functionally important.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth C], D	Serrate RNA effector molecule homolog,Serrate RNA effector molecule homolog	DNA binding binding nucleic acid binding mRNA cap binding complex binding protein-containing complex binding RNA binding protein-macromolecule adaptor activity molecular adaptor activity	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process negative regulation of biological process negative regulation of cellular process RNA processing negative regulation of macromolecule metabolic process negative regulation of metabolic process regulatory ncRNA processing regulatory ncRNA-mediated gene silencing primary miRNA processing negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process miRNA processing positive regulation of nervous system development multicellular organismal process regulation of developmental process cellular developmental process positive regulation of biological process cell development regulation of cell differentiation regulation of neurogenesis regulation of cell development regulation of nervous system development positive regulation of developmental process multicellular organism development neurogenesis positive regulation of cell differentiation cell differentiation anatomical structure development positive regulation of neurogenesis regulation of multicellular organismal process positive regulation of cellular process system development developmental process regulation of multicellular organismal development positive regulation of cell development nervous system development positive regulation of multicellular organismal process response to stimulus response to chemical response to arsenic-containing substance neuronal stem cell population maintenance maintenance of cell number stem cell population maintenance	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear body intracellular organelle nucleoplasm protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear body intracellular organelle nucleoplasm organelle lumen organelle membraneless organelle nuclear lumen
A, C [auth B]	Serrate RNA effector molecule homolog	DNA binding binding nucleic acid binding mRNA cap binding complex binding protein-containing complex binding RNA binding protein-macromolecule adaptor activity molecular adaptor activity	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process negative regulation of biological process negative regulation of cellular process RNA processing negative regulation of macromolecule metabolic process negative regulation of metabolic process regulatory ncRNA processing regulatory ncRNA-mediated gene silencing primary miRNA processing negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process miRNA processing positive regulation of nervous system development multicellular organismal process regulation of developmental process cellular developmental process positive regulation of biological process cell development regulation of cell differentiation regulation of neurogenesis regulation of cell development regulation of nervous system development positive regulation of developmental process multicellular organism development neurogenesis positive regulation of cell differentiation cell differentiation anatomical structure development positive regulation of neurogenesis regulation of multicellular organismal process positive regulation of cellular process system development developmental process regulation of multicellular organismal development positive regulation of cell development nervous system development positive regulation of multicellular organismal process response to stimulus response to chemical response to arsenic-containing substance neuronal stem cell population maintenance maintenance of cell number stem cell population maintenance	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear body intracellular organelle nucleoplasm protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear body intracellular organelle nucleoplasm organelle lumen organelle membraneless organelle nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth C], D	IPR021933	SERRATE/Ars2, N-terminal	Domain
B [auth C], D	IPR039727	SERRATE/Ars2	Family
B [auth C], D	IPR007042	SERRATE/Ars2 , C-terminal	Domain
B [auth C], D	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
A, C [auth B]	IPR021933	SERRATE/Ars2, N-terminal	Domain
A, C [auth B]	IPR039727	SERRATE/Ars2	Family
A, C [auth B]	IPR007042	SERRATE/Ars2 , C-terminal	Domain
A, C [auth B]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B [auth C], D	Pharos: Q9BXP5	astrocytic tumor Gaucher disease major depressive disorder medulloblastoma osteosarcoma psoriasis bipolar disorder hypertensive disorder malignant ependymoma Mitochondrial Diseases ovarian cancer Crohn disease inflammatory bowel disease malignant mesothelioma oligodendroglioma astrocytic tumor Gaucher disease major depressive disorder medulloblastoma osteosarcoma psoriasis bipolar disorder hypertensive disorder malignant ependymoma Mitochondrial Diseases ovarian cancer Crohn disease inflammatory bowel disease malignant mesothelioma oligodendroglioma pancreatic ductal adenocarcinoma
A, C [auth B]	Pharos: Q9BXP5	astrocytic tumor Gaucher disease major depressive disorder medulloblastoma osteosarcoma psoriasis bipolar disorder hypertensive disorder malignant ependymoma Mitochondrial Diseases ovarian cancer Crohn disease inflammatory bowel disease malignant mesothelioma oligodendroglioma astrocytic tumor Gaucher disease major depressive disorder medulloblastoma osteosarcoma psoriasis bipolar disorder hypertensive disorder malignant ependymoma Mitochondrial Diseases ovarian cancer Crohn disease inflammatory bowel disease malignant mesothelioma oligodendroglioma pancreatic ductal adenocarcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.